RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 LGALS8O00214 317 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 MPC2O95563 127 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 HMGA2P52926 109 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 CSNK1G2P78368 415 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 STK11Q15831 433 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 TMEM52BQ4KMG9 183 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 NDUFAF5Q5TEU4 345 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 HSDL2Q6YN16 418 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 TMEM91Q6ZNR0 172 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 SHISA5Q8N114 240 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 ZG16BQ96DA0 208 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 RNFT2Q96EX2 444 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 ZFP3Q96NJ6 502 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 MARVELD1Q9BSK0 173 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 FBXW2Q9UKT8 454 aa13.21□□□□□ -0.29
ATG3-202ENST00000402314 ZFR2Q9UPR6 939 aaKnown RBP13.21□□□□□ -0.29
ATG3-202ENST00000402314 KIAA1549LQ6ZVL6 1849 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 ARID1BQ8NFD5 2236 aaPredicted RBP13.21□□□□□ -0.3
ATG3-202ENST00000402314 TRBV23OR9-2A0A075B6M9 112 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 MPZL2O60487 215 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 RGS11O94810 467 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 CD3GP09693 182 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 FAM157BP0CG42 384 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 NR2F1P10589 423 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 PXNP49023 591 aaPredicted RBP13.21□□□□□ -0.3
ATG3-202ENST00000402314 EVX1P49640 407 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 SEC13P55735 322 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 PCBP4P57723 403 aaKnown RBP13.21□□□□□ -0.3
ATG3-202ENST00000402314 LASP1Q14847 261 aaKnown RBP13.21□□□□□ -0.3
ATG3-202ENST00000402314 AANATQ16613 207 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 PSRC1Q6PGN9 363 aaPredicted RBP13.21□□□□□ -0.3
ATG3-202ENST00000402314 KCTD20Q7Z5Y7 419 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 CCDC116Q8IYX3 515 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 CLDN22Q8N7P3 220 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 HMGB4Q8WW32 186 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 ATF6BQ99941 703 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 MCOLN1Q9GZU1 580 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 ZFP64Q9NPA5 681 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 GSTK1Q9Y2Q3 226 aa13.21□□□□□ -0.3
ATG3-202ENST00000402314 RAB36O95755 333 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 ACADMP11310 421 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 WNT4P56705 351 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 MFSD13AQ14CX5 517 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 GPR68Q15743 365 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 GDPGP1Q6ZNW5 385 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 CFAP77Q6ZQR2 320 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 ESPNLQ6ZVH7 1005 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 IQCHQ86VS3 1027 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 NUDT13Q86X67 352 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
ATG3-202ENST00000402314 OR8J1Q8NGP2 316 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 ZFPM2Q8WW38 1151 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 TTC9Q92623 222 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 NUP50Q9UKX7 468 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 ICKQ9UPZ9 632 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 CA3P07451 260 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 NCBP2P52298 156 aaKnown RBP eCLIP13.2□□□□□ -0.3
ATG3-202ENST00000402314 IRF4Q15306 451 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 C18orf63Q68DL7 685 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 TIGD3Q6B0B8 471 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 HDDC3Q8N4P3 179 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 SAMD12Q8N8I0 201 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 FAM181AQ8N9Y4 354 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 GANCQ8TET4 914 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 AP3S1Q92572 193 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 UFD1Q92890 307 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 SMARCD2Q92925 531 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 ZNF582Q96NG8 517 aaPredicted RBP13.2□□□□□ -0.3
ATG3-202ENST00000402314 PLA2G2FQ9BZM2 168 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 RHBGQ9H310 441 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 IGFLR1Q9H665 355 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 ENAMQ9NRM1 1142 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 SPTBP11277 2137 aa13.2□□□□□ -0.3
ATG3-202ENST00000402314 A0A0B4J203 849 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 ERI3O43414 337 aaKnown RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 RAF1P04049 648 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 H1F0P07305 194 aaKnown RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 GJA4P35212 333 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 BCL6P41182 706 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 RNF144AP50876 292 aaPredicted RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 PPP3R1P63098 170 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 PLK5Q496M5 336 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 AGBL4Q5VU57 503 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 OR2A1Q8NGT9 310 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 SMAP2Q8WU79 429 aaPredicted RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 RGMAQ96B86 450 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 ARMC5Q96C12 935 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 TTTY10Q9BZA0 68 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 SPHK1Q9NYA1 384 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 KCND3Q9UK17 655 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 ELF5Q9UKW6 265 aaPredicted RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 ATG4BQ9Y4P1 393 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 C1QTNF3-AMACRE9PGA6 284 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 SLC43A1O75387 559 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 SERPINI2O75830 405 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 GATBO75879 557 aaKnown RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 KAT7O95251 611 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms