RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ZFP41Q8N8Y5 198 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 ANKK1Q8NFD2 765 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 ASPNQ9BXN1 380 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 SAP130Q9H0E3 1048 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 PRDM7Q9NQW5 492 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 THSD1Q9NS62 852 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 SEC14L4Q9UDX3 406 aa13.12□□□□□ -0.31
SCAF4-202ENST00000399804 SERTM1A2A2V5 107 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 METTL12A8MUP2 240 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 PPM1BO75688 479 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SDC2P34741 201 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 TFF2Q03403 129 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 IL18Q14116 193 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 DUSP5Q16690 384 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF829Q3KNS6 432 aaPredicted RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 MANEAQ5SRI9 462 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 OR4K17Q8NGC6 315 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 HRASLS5Q96KN8 279 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 POLDIP3Q9BY77 421 aaKnown RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 TRIM36Q9NQ86 728 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 FAM186AA6NE01 2351 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SAGE2PA6NJ88 616 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 FCMRO60667 390 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 CBFA2T3O75081 653 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 CBX3Q13185 183 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 RUNX2Q13950 521 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ZXDCQ2QGD7 858 aaPredicted RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 DDI2Q5TDH0 399 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 C8orf82Q6P1X6 216 aaPredicted RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 GID4Q8IVV7 300 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SPEM1Q8N4L4 309 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 OR7G2Q8NG99 324 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 EXO5Q9H790 373 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SERINC1Q9NRX5 453 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ACER3Q9NUN7 267 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 VNN3Q9NY84 501 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 HCN2Q9UL51 889 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 PCYT1BQ9Y5K3 369 aaPredicted RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 NCOR1O75376 2440 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SLC35E2P0CK97 266 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF823P16415 610 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ITIH1P19827 911 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 HSD11B2P80365 405 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 RPL13AP3Q6NVV1 102 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 PIWIL3Q7Z3Z3 882 aaKnown RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 EID2Q8N6I1 236 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 OR4K13Q8NH42 304 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 DUSP23Q9BVJ7 150 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 GRHPRQ9UBQ7 328 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 GXYLT2A0PJZ3 443 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SLC35F4A4IF30 521 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 CDC40O60508 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 JMJD7P0C870 316 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 MAOAP21397 527 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 GADD45AP24522 165 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 NAA10P41227 235 aaPredicted RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ISL1P61371 349 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 KCNAB1Q14722 419 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 OR1Q1Q15612 314 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 TMEM184AQ6ZMB5 413 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ACBD7Q8N6N7 88 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 OR51L1Q8NGJ5 315 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 EDAQ92838 391 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 GFM1Q96RP9 751 aaKnown RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 LYRM4Q9HD34 91 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 SDHAF3Q9NRP4 125 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 CAB39Q9Y376 341 aaPredicted RBP13.11□□□□□ -0.31
SCAF4-202ENST00000399804 ST14Q9Y5Y6 855 aa13.11□□□□□ -0.31
SCAF4-202ENST00000399804 PATJQ8NI35 1801 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 A0A0A6YYD5 115 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 FABP12A6NFH5 140 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 ASNA1O43681 348 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 CTSVO60911 334 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 CTNSO60931 367 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 EML2O95834 649 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 GIMD1P0DJR0 217 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 EIF2B2P49770 351 aaKnown RBP13.1□□□□□ -0.31
SCAF4-202ENST00000399804 ANKDD1AQ495B1 522 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 ARTNQ5T4W7 220 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 IDNKQ5T6J7 187 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 FCRLBQ6BAA4 426 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 PLAG1Q6DJT9 500 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 OR52E2Q8NGJ4 325 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 GGHQ92820 318 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 ADAD1Q96M93 576 aaKnown RBP13.1□□□□□ -0.31
SCAF4-202ENST00000399804 EGLN3Q9H6Z9 239 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 SPINT1O43278 529 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 GALR3O60755 368 aaPredicted RBP13.1□□□□□ -0.31
SCAF4-202ENST00000399804 GFERP55789 205 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 PDE7AQ13946 482 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 CARTPTQ16568 116 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 MZT2BQ6NZ67 158 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 BORAQ6PGQ7 559 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 KRT74Q7RTS7 529 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms