RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 GPR137Q96N19 417 aa16.15■□□□□ 0.18
CTNS-203ENST00000399306 TBL1XR1Q9BZK7 514 aa16.15■□□□□ 0.18
CTNS-203ENST00000399306 UBQLN3Q9H347 655 aa16.15■□□□□ 0.18
CTNS-203ENST00000399306 ZNF703Q9H7S9 590 aaPredicted RBP16.15■□□□□ 0.18
CTNS-203ENST00000399306 ACKR4Q9NPB9 350 aa16.15■□□□□ 0.18
CTNS-203ENST00000399306 VAPAQ9P0L0 249 aa16.15■□□□□ 0.18
CTNS-203ENST00000399306 P2RX2Q9UBL9 471 aa16.15■□□□□ 0.18
CTNS-203ENST00000399306 FBP2O00757 339 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 SCDO00767 359 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 CBR3O75828 277 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 UNC5CO95185 931 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 IGHG3P01860 377 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 HPGDP15428 266 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 CD1EP15812 388 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 MSX1P28360 303 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 MASP1P48740 699 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 DSTNP60981 165 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 C17orf67Q0P5P2 114 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 GTF3C1Q12789 2109 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 ESPL1Q14674 2120 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 ZNF141Q15928 474 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.14■□□□□ 0.17
CTNS-203ENST00000399306 GRAMD1BQ3KR37 738 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 MMEL1Q495T6 779 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 GTDC1Q4AE62 458 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 FLYWCH1Q4VC44 716 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 RNFT1Q5M7Z0 435 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 COX20Q5RI15 118 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 CCNJQ5T5M9 372 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 GKAP1Q5VSY0 366 aaPredicted RBP16.14■□□□□ 0.17
CTNS-203ENST00000399306 BICRALQ6AI39 1079 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 DESI1Q6ICB0 168 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 PLCZ1Q86YW0 608 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 TMEM251Q8N6I4 163 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 OR4C3Q8NH37 302 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 CMTM5Q96DZ9 223 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 OTUB1Q96FW1 271 aaPredicted RBP16.14■□□□□ 0.17
CTNS-203ENST00000399306 ANKRD27Q96NW4 1050 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 CGREF1Q99674 301 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 SH3GL1Q99961 368 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 GID8Q9NWU2 228 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 SLAMF8Q9P0V8 285 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 SUCOQ9UBS9 1254 aaKnown RBP16.14■□□□□ 0.17
CTNS-203ENST00000399306 C15orf41Q9Y2V0 281 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 ZNF407Q9C0G0 2248 aa16.14■□□□□ 0.17
CTNS-203ENST00000399306 TMEM247A6NEH6 219 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 G3V3Y1 287 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 H3BNH8 94 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 KIAA0513O60268 411 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 HCN1O60741 890 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 CBX6O95503 412 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 MST1P26927 711 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 DCTP40126 519 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 ADH7P40394 386 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 CRATP43155 626 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 RFX3P48380 749 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 HPCAP84074 193 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 NFYCQ13952 458 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 GANABQ14697 944 aaKnown RBP16.13■□□□□ 0.17
CTNS-203ENST00000399306 KLHL26Q53HC5 615 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 CMPK2Q5EBM0 449 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.13■□□□□ 0.17
CTNS-203ENST00000399306 ZAR1Q86SH2 424 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 SNX32Q86XE0 403 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 GHDCQ8N2G8 530 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 FADS6Q8N9I5 356 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 RAB8BQ92930 207 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 AURKBQ96GD4 344 aaPredicted RBP16.13■□□□□ 0.17
CTNS-203ENST00000399306 CPPED1Q9BRF8 314 aaPredicted RBP16.13■□□□□ 0.17
CTNS-203ENST00000399306 GALNT9Q9HCQ5 603 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 A4GALTQ9NPC4 353 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 FBXO34Q9NWN3 711 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 ARMCX1Q9P291 453 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 PRDM4Q9UKN5 801 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 WDR45Q9Y484 360 aa16.13■□□□□ 0.17
CTNS-203ENST00000399306 FREM3P0C091 2139 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 A0A1B0GVC2 190 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 MRASO14807 208 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 NDUFB5O43674 189 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 SUSD5O60279 629 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 TNFRSF21O75509 655 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 HPNP05981 417 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 TFPTP0C1Z6 253 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 ETFAP13804 333 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 CRISP3P54108 245 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 FUT5Q11128 374 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 SLC10A1Q14973 349 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 REP15Q6BDI9 236 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 ZNF619Q8N2I2 560 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 WDSUB1Q8N9V3 476 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 OR8J3Q8NGG0 315 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 PNPT1Q8TCS8 783 aaKnown RBP16.12■□□□□ 0.17
CTNS-203ENST00000399306 LRRC37BQ96QE4 947 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 SPATA9Q9BWV2 254 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 TMEM38AQ9H6F2 299 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 MTHFD2LQ9H903 347 aaPredicted RBP16.12■□□□□ 0.17
CTNS-203ENST00000399306 PPP4R1LQ9P1A2 415 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 SEC14L3Q9UDX4 400 aa16.12■□□□□ 0.17
CTNS-203ENST00000399306 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.12■□□□□ 0.17
CTNS-203ENST00000399306 AP3M1Q9Y2T2 418 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms