RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SNTB1Q13884 538 aaKnown RBP12.14□□□□□ -0.47
VCX3A-202ENST00000398729 MLC1Q15049 377 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 BCL2A1Q16548 175 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 C6orf136Q5SQH8 315 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 RAET1LQ5VY80 246 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 ZCCHC12Q6PEW1 402 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 CHMP1BQ7LBR1 199 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 ADGRE4PQ86SQ3 457 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 MARCH3Q86UD3 253 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 TGIF2LYQ8IUE0 185 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 FNDC5Q8NAU1 212 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 OR6Y1Q8NGX8 325 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 DUSP19Q8WTR2 217 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 WNT2BQ93097 391 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 GIMAP5Q96F15 307 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 C3orf30Q96M34 536 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 ACBD3Q9H3P7 528 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 GSX1Q9H4S2 264 aaPredicted RBP12.14□□□□□ -0.47
VCX3A-202ENST00000398729 HHATLQ9HCP6 504 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 GIMAP2Q9UG22 337 aa12.14□□□□□ -0.47
VCX3A-202ENST00000398729 A0A1W2PRB8 838 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 LINC01387J3KSC0 135 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 RCBTB2O95199 551 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 HSPA4LO95757 839 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 ANGPTL1O95841 491 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 IGKV1D-16P01601 117 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 ALOX5P09917 674 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 EFNA1P20827 205 aaPredicted RBP12.13□□□□□ -0.47
VCX3A-202ENST00000398729 SERPINB4P48594 390 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 PRIM2P49643 509 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 AGFG1P52594 562 aaKnown RBP12.13□□□□□ -0.47
VCX3A-202ENST00000398729 B3GALT5-AS1P59052 145 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 EEF1A1P68104 462 aaKnown RBP12.13□□□□□ -0.47
VCX3A-202ENST00000398729 PTGR1Q14914 329 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 GRAMD1BQ3KR37 738 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 EEF1A1P5Q5VTE0 462 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 IL23RQ5VWK5 629 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 MFSD12Q6NUT3 480 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 EXOC3L1Q86VI1 746 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 KIF18BQ86Y91 864 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 GRAMD2AQ8IUY3 354 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 ZZZ3Q8IYH5 903 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 NATD1Q8N6N6 113 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 SLC16A11Q8NCK7 471 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 OR7A2PQ8NGA2 310 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 GOT1L1Q8NHS2 421 aaPredicted RBP12.13□□□□□ -0.47
VCX3A-202ENST00000398729 FBXO30Q8TB52 745 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 TUBGCP3Q96CW5 907 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 C1GALT1C1Q96EU7 318 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 PRPF18Q99633 342 aaKnown RBP12.13□□□□□ -0.47
VCX3A-202ENST00000398729 FOXC2Q99958 501 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 G6PC3Q9BUM1 346 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 C1orf50Q9BV19 199 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 SFXN3Q9BWM7 321 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 RTN4RQ9BZR6 473 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 ZCCHC3Q9NUD5 404 aaKnown RBP12.13□□□□□ -0.47
VCX3A-202ENST00000398729 ATAD3AQ9NVI7 634 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 CRIM1Q9NZV1 1036 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 CLCF1Q9UBD9 225 aa12.13□□□□□ -0.47
VCX3A-202ENST00000398729 IGLV3-32A0A0A0MS00 114 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 TM9SF1O15321 606 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 SERPINE1P05121 402 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 ACP2P11117 423 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 LAMP1P11279 417 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 PRPS1L1P21108 318 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 EEFSECP57772 596 aaKnown RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 FOXF2Q12947 444 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 MAD2L1Q13257 205 aaPredicted RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 DUSP5Q16690 384 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 LSM12Q3MHD2 195 aaKnown RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 GLYR1Q49A26 553 aaPredicted RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 FLYWCH1Q4VC44 716 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 CPTPQ5TA50 214 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 P4HA3Q7Z4N8 544 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 UBQLNLQ8IYU4 475 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 MEIOBQ8N635 442 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 COX18Q8N8Q8 333 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 FAM222BQ8WU58 562 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 JADE3Q92613 823 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 INTS12Q96CB8 462 aaKnown RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 FAM120BQ96EK7 910 aaKnown RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 PKNOX2Q96KN3 472 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 LIME1Q9H400 295 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 SSU72Q9NP77 194 aaKnown RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 SIRT3Q9NTG7 399 aaPredicted RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 CCM2LQ9NUG4 571 aaPredicted RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 JKAMPQ9P055 326 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 RAB21Q9UL25 225 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 EIF3LQ9Y262 564 aaKnown RBP12.12□□□□□ -0.47
VCX3A-202ENST00000398729 SNX8Q9Y5X2 465 aa12.12□□□□□ -0.47
VCX3A-202ENST00000398729 TUBAL3A6NHL2 446 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 ALG1L2C9J202 215 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 H3BML4 177 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 BIRC5O15392 142 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 HCRTR2O43614 444 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 NDUFB5O43674 189 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms