RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 SPAG17Q6Q759 2223 aa23.92■■□□□ 1.42
SHARPIN-202ENST00000398712 NUDT21O43809 227 aaKnown RBP23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 CDC123O75794 336 aaPredicted RBP23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 PTHP01270 115 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 THY1P04216 161 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 LIPAP38571 399 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 ENTPD1P49961 510 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 EMDP50402 254 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 SYT16Q17RD7 645 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 ACSM5Q6NUN0 579 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 PELOQ9BRX2 385 aaKnown RBP23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 SPRTNQ9H040 489 aaPredicted RBP23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 EGLN3Q9H6Z9 239 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 ERVMER34-1Q9H9K5 563 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 CAPN10Q9HC96 672 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 TESQ9UGI8 421 aaKnown RBP23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 NPIPA5A0A0B4J1W7 369 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 NPIPA7E9PJI5 369 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 TLX2O43763 284 aaPredicted RBP23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 PRKYO43930 277 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 PRAMEF2O60811 474 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 NPIPA8P0DM63 369 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 PSG6Q00889 435 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 BIKQ13323 160 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 NCF4Q15080 339 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 FLYWCH1Q4VC44 716 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 MRGPREQ86SM8 312 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 CROCCP3Q8IVE0 287 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 OR51Q1Q8NH59 317 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 TMEM255BQ8WV15 326 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 PLA2G12AQ9BZM1 189 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 C14orf105Q9NVL8 296 aa23.91■■□□□ 1.42
SHARPIN-202ENST00000398712 DCNP07585 359 aaKnown RBP23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 OR1D5P58170 312 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 VBP1P61758 197 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 BTG2P78543 158 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 ZNF91Q05481 1191 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 ERV3-1Q14264 604 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 SNAPC1Q16533 368 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 SLC46A3Q7Z3Q1 461 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 MEX3DQ86XN8 651 aaKnown RBP23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 PLXDC1Q8IUK5 500 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 NRMQ8IXM6 262 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 OSTF1Q92882 214 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 TMEM80Q96HE8 168 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 SLC38A2Q96QD8 506 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 IER2Q9BTL4 223 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 TSSK6Q9BXA6 273 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 TEX12Q9BXU0 123 aa23.9■■□□□ 1.42
SHARPIN-202ENST00000398712 IGHV1OR21-1A0A087WYE8 117 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 DUX1O43812 170 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 FOXD2O60548 495 aaPredicted RBP23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 DBTP11182 482 aaKnown RBP23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 CD1CP29017 333 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 SSTR4P31391 388 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 ARL4DP49703 201 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 LSM3P62310 102 aaKnown RBP23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 SERTAD2Q14140 314 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 ZNF267Q14586 743 aaPredicted RBP23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 WDR36Q8NI36 951 aaKnown RBP23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 NDNFQ8TB73 568 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 LGALS12Q96DT0 336 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 VSTM2LQ96N03 204 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 DSN1Q9H410 356 aa23.89■■□□□ 1.42
SHARPIN-202ENST00000398712 EFCAB9A8MZ26 197 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 KLF4O43474 513 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 CSTF2P33240 577 aaKnown RBP eCLIP23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 GALNSP34059 522 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 HSD11B2P80365 405 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 EFNB1P98172 346 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 SRSF5Q13243 272 aaKnown RBP23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 OR1Q1Q15612 314 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 DGUOKQ16854 277 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 ARMCX4Q5H9R4 360 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 METTL27Q8N6F8 245 aaPredicted RBP23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 TMEM163Q8TC26 289 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 CLDN16Q9Y5I7 305 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 A0A1B0GVT2 93 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 TTC36A6NLP5 189 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 SNTNA6NMZ2 147 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 AIREO43918 545 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 NTN1O95631 604 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 INHBBP09529 407 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 GKN3PP0CG01 181 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 PRG2P13727 222 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 GLB1P16278 677 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 MAOAP21397 527 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 HTR2AP28223 471 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 GPR3P46089 330 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 SERPINB10P48595 397 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 CLK1P49759 484 aaKnown RBP23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 SYT14P1Q58G82 188 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 RNF113BQ8IZP6 322 aaKnown RBP23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 OR8D4Q8NGM9 314 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 LRR1Q96L50 414 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 ZNF559Q9BR84 538 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 ENAMQ9NRM1 1142 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 CUTCQ9NTM9 273 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 TBC1D23Q9NUY8 699 aa23.88■■□□□ 1.41
SHARPIN-202ENST00000398712 TRIOO75962 3097 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms