RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SEC61A2Q9H9S3 476 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 TAS2R7Q9NYW3 318 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 TNFRSF10DQ9UBN6 386 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 BAIAP2Q9UQB8 552 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 A0A1W2PR77 199 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SERINC4A6NH21 518 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 C11orf98E9PRG8 122 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 ACOX3O15254 700 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 FRS3O43559 492 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 STK17BO94768 372 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SORBS2O94875 1100 aaKnown RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 GM2AP17900 193 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 BTG2P78543 158 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SLC14A1Q13336 389 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 GAB1Q13480 694 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 GAS6Q14393 721 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 MICAQ29983 383 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF385BQ569K4 471 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 MRPL2Q5T653 305 aaKnown RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SAXO2Q658L1 398 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 VN1R4Q7Z5H5 301 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 MMP21Q8N119 569 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM239Q8WW34 195 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 CXorf21Q9HAI6 301 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 AMBNQ9NP70 447 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 CNOT11Q9UKZ1 510 aaKnown RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 VDAC3Q9Y277 283 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SH3PXD2BA1X283 911 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SEC14L5O43304 696 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 FMO6PO60774 539 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 GKN3PP0CG01 181 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 PRKAR1BP31321 381 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 MRPS15P82914 257 aaKnown RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 DMWDQ09019 674 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 C17orf67Q0P5P2 114 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 NPRL3Q12980 569 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 COX20Q5RI15 118 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 SLC35F1Q5T1Q4 408 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 PTRH1Q86Y79 214 aaKnown RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 GID4Q8IVV7 300 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 CMIPQ8IY22 773 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 CACTIN-AS1Q8N1I8 211 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 UBE2J2Q8N2K1 259 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 OR8J1Q8NGP2 316 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 ACOT11Q8WXI4 607 aaPredicted RBP7.71□□□□□ -1.18
PTPRD-204ENST00000397606 NUAK2Q9H093 628 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 CKLFQ9UBR5 152 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 MIA3Q5JRA6 1907 aa7.71□□□□□ -1.18
PTPRD-204ENST00000397606 FAM25AB3EWG3 89 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 FAM25CB3EWG5 89 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 FAM25GB3EWG6 89 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 P2RX6O15547 441 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 IL33O95760 270 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 FMO3P31513 532 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 ARHGAP11AQ6P4F7 1023 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 TSLPQ969D9 159 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 FBXL20Q96IG2 436 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 DCBLD2Q96PD2 775 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 NMNAT1Q9HAN9 279 aaPredicted RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 IGHV3-20A0A0C4DH32 117 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 GALR2O43603 387 aaPredicted RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 TBX19O60806 448 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 UTS2O95399 124 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 PABPC4LP0CB38 370 aaKnown RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CKMT1AP12532 417 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 PPICP45877 212 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 GPR4P46093 362 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 PPP1CAP62136 330 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 KIAA0040Q15053 153 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 OGFOD3Q6PK18 319 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CAMKMTQ7Z624 323 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 D2HGDHQ8N465 521 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 B3GNT7Q8NFL0 401 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 ADAMTS16Q8TE57 1224 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CNRIP1Q96F85 164 aaPredicted RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 DCUN1D5Q9BTE7 237 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CARD8Q9Y2G2 431 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 ASB4Q9Y574 426 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 COMMD3-BMI1R4GMX3 469 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 PNMA8CA0A1B0GUJ8 204 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 SLC30A4O14863 429 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 MAGEB3O15480 346 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 PLOD3O60568 738 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 SNAP29O95721 258 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 KCNJ5P48544 419 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CTBP2P56545 445 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CLRN1P58418 232 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 PRPS1P60891 318 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 GABREP78334 506 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 ILKQ13418 452 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 SLC22A10Q63ZE4 541 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 SLC23A3Q6PIS1 610 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 KLHL36Q8N4N3 616 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 MEIOBQ8N635 442 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 OR7G2Q8NG99 324 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 OMA1Q96E52 524 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 CSF3RQ99062 836 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 COMMD4Q9H0A8 199 aa7.7□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF768Q9H5H4 540 aaKnown RBP7.7□□□□□ -1.18
PTPRD-204ENST00000397606 FAM60AQ9NP50 221 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms