RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 TMEM19Q96HH6 336 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 ABCG5Q9H222 651 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 BCL9LQ86UU0 1499 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 FAM171A2A8MVW0 826 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 DVL2O14641 736 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 PRRG2O14669 202 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 AGTR1P30556 359 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 PBX2P40425 430 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 MPPED2Q15777 294 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 ZBED5Q49AG3 693 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 IER5LQ5T953 404 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 NANOGP8Q6NSW7 305 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 PLBD1Q6P4A8 553 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 SLC16A14Q7RTX9 510 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 TSPAN33Q86UF1 283 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 CPNE8Q86YQ8 564 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 OR5AK2Q8NH90 309 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 RNF128Q8TEB7 428 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 PIGCQ92535 297 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 TANKQ92844 425 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 MS4A4EQ96PG1 132 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 TSNAXQ99598 290 aaKnown RBP6.8□□□□□ -1.32
UPF2-203ENST00000397053 EPHX3Q9H6B9 360 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 GAREM1Q9H706 876 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 FAIMQ9NVQ4 179 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 GFOD1Q9NXC2 390 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 F5P12259 2224 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 TOXO94900 526 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 BPIP17213 487 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 FUT1P19526 365 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 CDKN2CP42773 168 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 PTH2RP49190 550 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 ATP1B3P54709 279 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 PHC1P78364 1004 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 MRPS21P82921 87 aaKnown RBP6.8□□□□□ -1.32
UPF2-203ENST00000397053 HABP2Q14520 560 aaPredicted RBP6.8□□□□□ -1.32
UPF2-203ENST00000397053 PLCXD3Q63HM9 321 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 OR5M10Q6IEU7 315 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 DTX3Q8N9I9 347 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 OR7G2Q8NG99 324 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 OR5AR1Q8NGP9 310 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 OR1J2Q8NGS2 313 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 PSMF1Q92530 271 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 UPRTQ96BW1 309 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 RSPRY1Q96DX4 576 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 BSCL2Q96G97 398 aaPredicted RBP6.8□□□□□ -1.32
UPF2-203ENST00000397053 SULT4A1Q9BR01 284 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 C16orf70Q9BSU1 422 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 SLC6A16Q9GZN6 736 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 MKS1Q9NXB0 559 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 KLHL9Q9P2J3 617 aa6.8□□□□□ -1.32
UPF2-203ENST00000397053 A0A1W2PQ09 198 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 B4DXG7 233 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 RAD1O60671 282 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 SLITRK5O94991 958 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 PTGS2P35354 604 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 IDUAP35475 653 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 DLSTP36957 453 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 EFNA3P52797 238 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 SPHARQ15513 63 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 CYP1B1Q16678 543 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 AARDQ4LEZ3 155 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 PDLIM3Q53GG5 364 aaPredicted RBP6.79□□□□□ -1.32
UPF2-203ENST00000397053 PAN3Q58A45 887 aaKnown RBP6.79□□□□□ -1.32
UPF2-203ENST00000397053 SLX4IPQ5VYV7 408 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 COMMD6Q7Z4G1 85 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 TMEM173Q86WV6 379 aaPredicted RBP6.79□□□□□ -1.32
UPF2-203ENST00000397053 MDGA1Q8NFP4 955 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 ZNF775Q96BV0 537 aaPredicted RBP6.79□□□□□ -1.32
UPF2-203ENST00000397053 RHBDF1Q96CC6 855 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 RDH12Q96NR8 316 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 UHRF1Q96T88 793 aaPredicted RBP6.79□□□□□ -1.32
UPF2-203ENST00000397053 STARD5Q9NSY2 213 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 CPNE7Q9UBL6 633 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 LSM5Q9Y4Y9 91 aaKnown RBP6.79□□□□□ -1.32
UPF2-203ENST00000397053 HCFC2Q9Y5Z7 792 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 CD8B2A6NJW9 211 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 PCDH17O14917 1159 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 AQP9O43315 295 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 CD8BP10966 210 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 CERS1P27544 350 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 PRSS3P35030 304 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 P2RX1P51575 399 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 SSTP61278 116 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 HTD2P86397 168 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 KCNAB2Q13303 367 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 MPP7Q5T2T1 576 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 LIPIQ6XZB0 460 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 AAED1Q7RTV5 226 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 PXKQ7Z7A4 578 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 ZNF619Q8N2I2 560 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 CYB561A3Q8NBI2 242 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 OR8J3Q8NGG0 315 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 RHEBL1Q8TAI7 183 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 ZC3HAV1LQ96H79 300 aaKnown RBP6.79□□□□□ -1.32
UPF2-203ENST00000397053 OR4K3Q96R72 315 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 CCM2LQ9NUG4 571 aaPredicted RBP6.79□□□□□ -1.32
UPF2-203ENST00000397053 HCFC1R1Q9NWW0 138 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 C5AR2Q9P296 337 aa6.79□□□□□ -1.32
UPF2-203ENST00000397053 RABL2AQ9UBK7 228 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms