RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 A0A1W2PQ72 361 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 M0QX08 132 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 PGRMC2O15173 223 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 CLIC3O95833 236 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 CCT3P49368 545 aaKnown RBP16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 TUBA4AP68366 448 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 PPP1R8Q12972 351 aaKnown RBP16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 ZIK1Q3SY52 487 aaPredicted RBP16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 ANKRD34AQ69YU3 496 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 REEP3Q6NUK4 255 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 TTC33Q6PID6 262 aaPredicted RBP16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 LINC00696Q6ZRV3 163 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 ZC3H7AQ8IWR0 971 aaKnown RBP16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 OFCC1Q8IZS5 231 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 CA13Q8N1Q1 262 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 SUN3Q8TAQ9 357 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 LZICQ8WZA0 190 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 CNRIP1Q96F85 164 aaPredicted RBP16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 EPYCQ99645 322 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 AMBRA1Q9C0C7 1298 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 SERHL2Q9H4I8 314 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 FAM118AQ9NWS6 357 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 NDUFA13Q9P0J0 144 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 CDC14AQ9UNH5 594 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 MRPS33Q9Y291 106 aaKnown RBP16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 U3KQV3 271 aa16.16■□□□□ 0.18
TNFSF13-205ENST00000396545 SMIM31A0A1B0GVY4 71 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 WASHC1A8K0Z3 465 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 CYR61O00622 381 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 ERAL1O75616 437 aaKnown RBP16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 OPN1SWP03999 348 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 TFPTP0C1Z6 253 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 COX6A1P12074 109 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 RNH1P13489 461 aaKnown RBP16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 FBLP22087 321 aaKnown RBP16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 PRKACGP22612 351 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 ANXA11P50995 505 aaKnown RBP16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 NCBP2P52298 156 aaKnown RBP eCLIP16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 ARHGDIAP52565 204 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 DSG2Q14126 1118 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 SPDYE7PQ495Y7 208 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 VWA2Q5GFL6 755 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 LAPTM4BQ86VI4 370 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 ARMC8Q8IUR7 673 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 METTL25Q8N6Q8 603 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 ZNF681Q96N22 645 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 REEP1Q9H902 201 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 TUBA8Q9NY65 449 aaPredicted RBP16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 NDUFAF4Q9P032 175 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 OSGIN2Q9Y236 505 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 APCP25054 2843 aa16.15■□□□□ 0.18
TNFSF13-205ENST00000396545 HMGN4O00479 90 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 LRRTM2O43300 516 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 FOXS1O43638 330 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 HS6ST1O60243 411 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 DIRAS1O95057 198 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 BMP10O95393 424 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 ITGAMP11215 1152 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 GPC1P35052 558 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 RAD23AP54725 363 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 NR1H2P55055 460 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 RPS26P62854 115 aaKnown RBP16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 SNRPNP63162 240 aaKnown RBP16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 BIKQ13323 160 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 MAPK11Q15759 364 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 KDM4DQ6B0I6 523 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 RPUSD3Q6P087 351 aaKnown RBP16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 TNFAIP8L2Q6P589 184 aaPredicted RBP16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 FAM180AQ6UWF9 173 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 NDUFAF7Q7L592 441 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 LRRC25Q8N386 305 aaPredicted RBP16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 ZNF786Q8N393 782 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 OR9A4Q8NGU2 314 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 SLC38A5Q8WUX1 472 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 PSMF1Q92530 271 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 MUS81Q96NY9 551 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 ZNF347Q96SE7 839 aa16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 SAMHD1Q9Y3Z3 626 aaKnown RBP16.14■□□□□ 0.17
TNFSF13-205ENST00000396545 NSG1A0A0A6YYJ2 146 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 PRAMEF25A6NGN4 478 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 GLOD5A6NK44 160 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 IDSB3KWA1 339 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 SGK494L7N484 410 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 SLC16A6O15403 523 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 CHST10O43529 356 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 ATP6V1B1P15313 513 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 DAPP51397 102 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 PRR5P85299 388 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 DUSP2Q05923 314 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 SATL1Q86VE3 508 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 CYP4Z1Q86W10 505 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 ZNF595Q8IYB9 648 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 ZNF555Q8NEP9 628 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 OR56A1Q8NGH5 318 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 SPPL2AQ8TCT8 520 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 GEMIN6Q8WXD5 167 aaKnown RBP16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 TMEM19Q96HH6 336 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 SLC35G5Q96KT7 338 aa16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 MYCBPQ99417 103 aaPredicted RBP16.13■□□□□ 0.17
TNFSF13-205ENST00000396545 C3orf14Q9HBI5 128 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms