RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TMEM151BQ8IW70 566 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 GDPD1Q8N9F7 314 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ZNF680Q8NEM1 530 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR5AR1Q8NGP9 310 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 BAHD1Q8TBE0 780 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 SLC22A8Q8TCC7 542 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 THAP3Q8WTV1 239 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 FAM3CQ92520 227 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 MARC2Q969Z3 335 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RADILQ96JH8 1075 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 STACQ99469 402 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SEC22CQ9BRL7 303 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 DOHHQ9BU89 302 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 GSDMCQ9BYG8 508 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 KRT84Q9NSB2 600 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 MRPS18AQ9NVS2 196 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 PTGFRNQ9P2B2 879 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PHF11Q9UIL8 331 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 IGHV1OR15-9A0A0B4J2B8 117 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 A0A1W2PP55 124 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 NCF1BA6NI72 391 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 NCF1CA8MVU1 366 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 RFXANKO14593 260 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 YKT6O15498 198 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 NDUFS4O43181 175 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 GPX5O75715 221 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 GUCA1CO95843 209 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 AK1P00568 194 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ANXA4P09525 319 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 GGT2P36268 569 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CDKN2CP42773 168 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RAD52P43351 418 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 XCR1P46094 333 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CCT3P49368 545 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 BLKP51451 505 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SMSP52788 366 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CLDN20P56880 219 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RAB25P57735 213 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 STXBP1P61764 594 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 HMGCS1Q01581 520 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS41-203ENST00000395969 TGM3Q08188 693 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RIPPLY1Q0D2K3 151 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 MAB21L1Q13394 359 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 LAPTM4AQ15012 233 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SSX1Q16384 188 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ZNF385BQ569K4 471 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CLLU1Q5K131 121 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SLC48A1Q6P1K1 146 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 TRIM40Q6P9F5 258 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ZNF852Q6ZMS4 543 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CFAP77Q6ZQR2 320 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 KRT73Q86Y46 540 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SYT12Q8IV01 421 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 P3H2Q8IVL5 708 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR8H3Q8N146 312 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR2L13Q8N349 312 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 SPEM1Q8N4L4 309 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 LILRA3Q8N6C8 439 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 KRTCAP2Q8N6L1 136 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 C1orf52Q8N6N3 182 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR8H1Q8NGG4 311 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR52E1Q8NGJ3 308 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 C9orf43Q8TAL5 461 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 RNF138Q8WVD3 245 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 OR1E3Q8WZA6 343 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 EXT2Q93063 718 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 FBXW5Q969U6 566 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 ZDHHC16Q969W1 377 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 KLHL15Q96M94 604 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 CDCA4Q9BXL8 241 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 RERGLQ9H628 205 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PDP1Q9P0J1 537 aaPredicted RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 ZNF69Q9UC07 566 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 POMT2Q9UKY4 750 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 PPIEQ9UNP9 301 aaKnown RBP5.02□□□□□ -1.61
VPS41-203ENST00000395969 CMAHPQ9Y471 501 aa5.02□□□□□ -1.61
VPS41-203ENST00000395969 FAM86C2PA6NEL3 165 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 EFCAB10A6NFE3 127 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 MYL12BO14950 172 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 LGI1O95970 557 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 IFNA16P05015 189 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 TPOP07202 933 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 THBS1P07996 1170 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 STSP08842 583 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 RRASP10301 218 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 LAMP1P11279 417 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 PIPP12273 146 aaPredicted RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 MYL12AP19105 171 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 POU1F1P28069 291 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 GPR3P46089 330 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 ANXA11P50995 505 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 RORCP51449 518 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 PPP2CBP62714 309 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 PPP2CAP67775 309 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 TP53BP2Q13625 1128 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 DOC2BQ14184 412 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 FZD2Q14332 565 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 LARS2Q15031 903 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 PRSS53Q2L4Q9 553 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms