RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ACTR6Q9GZN1 396 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TBC1D29Q9UFV1 150 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GPR171O14626 319 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 IGLV3-19P01714 112 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 S1PR1P21453 382 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GALP22466 123 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 WNT4P56705 351 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 RHAGQ02094 409 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PLAG1Q6DJT9 500 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 C3P1Q6ZMU1 363 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 C17orf47Q8NEP4 570 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 NT5CQ8TCD5 201 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TGM7Q96PF1 710 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 INSM2Q96T92 566 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CRB3Q9BUF7 120 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 LTB4R2Q9NPC1 389 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF337Q9Y3M9 751 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF726A6NNF4 738 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ACOT7O00154 380 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TNFSF14O43557 240 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 EIF1BO60739 113 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SNAP29O95721 258 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF267Q14586 743 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 DCAF12Q5T6F0 453 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RAB43Q86YS6 212 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MCEMP1Q8IX19 187 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM130Q8N3G9 435 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TCEANCQ8N8B7 351 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PJA1Q8NG27 643 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GPBAR1Q8TDU6 330 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 DEDD2Q8WXF8 326 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 LCORQ96JN0 433 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SLC30A3Q99726 388 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ALOXE3Q9BYJ1 711 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 DIABLOQ9NR28 239 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SPHK1Q9NYA1 384 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MAU2Q9Y6X3 613 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PLXND1Q9Y4D7 1925 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 EIF4E2O60573 245 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CPNE3O75131 537 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MTRF1O75570 445 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 KRT33AO76009 404 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CRHBPP24387 322 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GANABQ14697 944 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RNF220Q5VTB9 566 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MFSD12Q6NUT3 480 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RPS27LQ71UM5 84 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SLCO6A1Q86UG4 719 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 RIMKLAQ8IXN7 391 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CLECL1Q8IZS7 167 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 IL22RA1Q8N6P7 574 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PSMA8Q8TAA3 256 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TTC9Q92623 222 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PIGKQ92643 395 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SCGB3A2Q96PL1 93 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GALNT8Q9NY28 637 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 POMT2Q9UKY4 750 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PLXNB3Q9ULL4 1909 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PRR14LQ5THK1 2151 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TRBV23OR9-2A0A075B6M9 112 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 B4GALT2O60909 372 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 LGI1O95970 557 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MT-ND1P03886 318 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 HEXBP07686 556 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 POU2F1P14859 743 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TOMM20Q15388 145 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CDKN3Q16667 212 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SHFQ7M4L6 423 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TP53I13Q8NBR0 393 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 OR1E3Q8WZA6 343 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CUTCQ9NTM9 273 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ASB6Q9NWX5 421 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ING3Q9NXR8 418 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CA14Q9ULX7 337 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 POLHQ9Y253 713 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MSL3P1P0C860 447 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 APEHP13798 732 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TACR1P25103 407 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 BSGP35613 385 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 KCNJ5P48544 419 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ZXDBP98169 803 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 FOXD4Q12950 439 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 UBAP2Q5T6F2 1119 aaKnown RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM107Q6UX40 140 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 ARL14Q8N4G2 192 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 VANGL1Q8TAA9 524 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM239Q8WW34 195 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SCARF2Q96GP6 870 aaPredicted RBP3.17□□□□□ -1.9
VPS13C-203ENST00000395896 PRRG4Q9BZD6 226 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 B3GAT2Q9NPZ5 323 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 MOKQ9UQ07 419 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 NAALAD2Q9Y3Q0 740 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 UBE2QL1A1L167 161 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC182A6NF36 153 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 FLRT2O43155 660 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 GSTT2BP0CG30 244 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 C8orf89P0DMQ9 161 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 SDHBP21912 280 aa3.17□□□□□ -1.9
VPS13C-203ENST00000395896 FPR3P25089 353 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms