RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 PGBD2Q6P3X8 592 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 KLHL17Q6TDP4 642 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 Q6ZPB1 254 aaPredicted RBP12.41□□□□□ -0.42
CLIC1-209ENST00000395892 ZER1Q7Z7L7 766 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 PPP1R3BQ86XI6 285 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 AMER2Q8N7J2 671 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 BCORP1Q8N888 145 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 SUMF1Q8NBK3 374 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 SLC2A12Q8TD20 617 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 ADAMTS16Q8TE57 1224 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 HDAC2Q92769 488 aaKnown RBP12.41□□□□□ -0.42
CLIC1-209ENST00000395892 UBE2FQ969M7 185 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 FKBP10Q96AY3 582 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 SLC46A1Q96NT5 459 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 MCHR1Q99705 422 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 FNDC11Q9BVV2 318 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 TRIM45Q9H8W5 580 aaPredicted RBP12.41□□□□□ -0.42
CLIC1-209ENST00000395892 AKIRIN1Q9H9L7 192 aaPredicted RBP12.41□□□□□ -0.42
CLIC1-209ENST00000395892 MKL2Q9ULH7 1088 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 TMCC3Q9ULS5 477 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 MGAT4BQ9UQ53 548 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 PCDHGA6Q9Y5G7 932 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 PCDHGA10Q9Y5H3 936 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 HSPE1-MOB4S4R3N1 261 aa12.41□□□□□ -0.42
CLIC1-209ENST00000395892 A0A087WUU8 490 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 OR5F1O95221 314 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 NTN1O95631 604 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 HBQ1P09105 142 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 ZNF806P0C7X5 589 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CCL4P13236 92 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CYP4B1P13584 511 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 ZNF28P17035 718 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CDH2P19022 906 aaPredicted RBP12.4□□□□□ -0.42
CLIC1-209ENST00000395892 AGXTP21549 392 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 HTR2AP28223 471 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 GGT2P36268 569 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 ALDH3B2P48448 385 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 IL1RL1Q01638 556 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 FOXD4Q12950 439 aaPredicted RBP12.4□□□□□ -0.42
CLIC1-209ENST00000395892 SF3A2Q15428 464 aaKnown RBP12.4□□□□□ -0.42
CLIC1-209ENST00000395892 NSDHLQ15738 373 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.4□□□□□ -0.421e-8■■■■□ 25.4
CLIC1-209ENST00000395892 MRPL2Q5T653 305 aaKnown RBP12.4□□□□□ -0.42
CLIC1-209ENST00000395892 MFSD4BQ5TF39 518 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 FOXB2Q5VYV0 432 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 C1orf94Q6P1W5 598 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CD300LDQ6UXZ3 194 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 LANCL3Q6ZV70 420 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 PRICKLE2Q7Z3G6 844 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 GRAMD2AQ8IUY3 354 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 PRSS58Q8IYP2 241 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 NFAM1Q8NET5 270 aaPredicted RBP12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CNOT9Q92600 299 aaKnown RBP12.4□□□□□ -0.42
CLIC1-209ENST00000395892 GTPBP3Q969Y2 492 aaKnown RBP12.4□□□□□ -0.42
CLIC1-209ENST00000395892 GPA33Q99795 319 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CTRCQ99895 268 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 SLC26A1Q9H2B4 701 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 EVA1AQ9H8M9 152 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 FBXO8Q9NRD0 319 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CTPS2Q9NRF8 586 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 RXFP3Q9NSD7 469 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 KLHL28Q9NXS3 571 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 KIF17Q9P2E2 1029 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 AASSQ9UDR5 926 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 FTSJ1Q9UET6 329 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 CBLCQ9ULV8 474 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 GMPPBQ9Y5P6 360 aa12.4□□□□□ -0.42
CLIC1-209ENST00000395892 RALGAPA1Q6GYQ0 2036 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 CPSF4LA6NMK7 179 aaKnown RBP12.39□□□□□ -0.43
CLIC1-209ENST00000395892 FMO6PO60774 539 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 ADAP00813 363 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 CCNYL3P0C7X3 344 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 GKN3PP0CG01 181 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 POU2F1P14859 743 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 GABRB1P18505 474 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 CRHBPP24387 322 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 CSTF2P33240 577 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLIC1-209ENST00000395892 ACAA2P42765 397 aaKnown RBP12.39□□□□□ -0.43
CLIC1-209ENST00000395892 RPL5P46777 297 aaKnown RBP12.39□□□□□ -0.43
CLIC1-209ENST00000395892 HLCSP50747 726 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 ATP12AP54707 1039 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 RGS8P57771 180 aaPredicted RBP12.39□□□□□ -0.43
CLIC1-209ENST00000395892 TUBA4AP68366 448 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 ILKQ13418 452 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 MAD2L1BPQ15013 274 aaPredicted RBP12.39□□□□□ -0.43
CLIC1-209ENST00000395892 TRAM2Q15035 370 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 DECR1Q16698 335 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 FLYWCH1Q4VC44 716 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 KLHL26Q53HC5 615 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 EIPR1Q53HC9 387 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 FGD3Q5JSP0 725 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 RBM48Q5RL73 367 aaKnown RBP12.39□□□□□ -0.43
CLIC1-209ENST00000395892 MRPL14Q6P1L8 145 aaKnown RBP12.39□□□□□ -0.43
CLIC1-209ENST00000395892 SHISA6Q6ZSJ9 500 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 ANKRD37Q7Z713 158 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 NKAIN4Q8IVV8 208 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 NLGN4XQ8N0W4 816 aa12.39□□□□□ -0.43
CLIC1-209ENST00000395892 TAGAPQ8N103 731 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms