RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MCTS1Q9ULC4 181 aaKnown RBP12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 PCDHGB1Q9Y5G3 927 aa12.06□□□□□ -0.48
VCPKMT-201ENST00000395859 IGLV3-32A0A0A0MS00 114 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 LOC390937A0A1W2PQ73 354 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 SHISA8B8ZZ34 492 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 EPB42P16452 691 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 PSMA4P25789 261 aaKnown RBP12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 CORO7P57737 925 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 TAS2R39P59534 338 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 DR1Q01658 176 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 CAV1Q03135 178 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 CUL3Q13618 768 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 OCLNQ16625 522 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 SWI5Q1ZZU3 235 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 TRMT12Q53H54 448 aaKnown RBP12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 GRHL2Q6ISB3 625 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 LARP4Q71RC2 724 aaKnown RBP eCLIP12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 HDXQ7Z353 690 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 RNF128Q8TEB7 428 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 CERS2Q96G23 380 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 VSTM2LQ96N03 204 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 MTERF1Q99551 399 aaKnown RBP12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 RHOXF2Q9BQY4 288 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 RBM4Q9BWF3 364 aaKnown RBP12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 BPESC1Q9GZL8 116 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 DERL2Q9GZP9 239 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 PRODH2Q9UF12 536 aa12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 V9GYY5 206 aaPredicted RBP12.05□□□□□ -0.48
VCPKMT-201ENST00000395859 ESYT3A0FGR9 886 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 LRP5LA4QPB2 252 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 CXCL13O43927 109 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 LILRA1O75019 489 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 TTC4O95801 387 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 TACSTD2P09758 323 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 PTX3P26022 381 aaPredicted RBP12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 FABP6P51161 128 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 GPX6P59796 221 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 SPANXN3Q5MJ09 141 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 TIMM23BQ5SRD1 257 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 CCDC137Q6PK04 289 aaKnown RBP12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 CYP20A1Q6UW02 462 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 SSX8Q7RTT4 187 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 LRRC70Q7Z2Q7 622 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 NUDT13Q86X67 352 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 IGDCC3Q8IVU1 814 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 LINC01356Q8N9X3 169 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 HPS1Q92902 700 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 SORCS2Q96PQ0 1159 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 NPAS1Q99742 590 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 CENPKQ9BS16 269 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 MCMBPQ9BTE3 642 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 CD244Q9BZW8 370 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 BRINP2Q9C0B6 783 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 METTL17Q9H7H0 456 aaPredicted RBP12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 FLRT3Q9NZU0 649 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 KLHL13Q9P2N7 655 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 MGAT4BQ9UQ53 548 aa12.04□□□□□ -0.48
VCPKMT-201ENST00000395859 A0A0J9YW62 118 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 TRIM77I1YAP6 450 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 SCO2O43819 266 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 NME6O75414 186 aaPredicted RBP12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 GBAP04062 536 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 PCSK2P16519 638 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 ZNF17P17021 662 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 COX5AP20674 150 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 DVL1P1P54792 670 aaPredicted RBP12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 CDH15P55291 814 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 PSPHP78330 225 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 MRPS35P82673 323 aaKnown RBP12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 DDX39BQ13838 428 aaKnown RBP12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 OR4D1Q15615 310 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 BEND6Q5SZJ8 279 aaPredicted RBP12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 C6orf163Q5TEZ5 329 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 PPP4R4Q6NUP7 873 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 SLC48A1Q6P1K1 146 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 TTC27Q6P3X3 843 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 Q6ZT83 130 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 ZC3HC1Q86WB0 502 aaKnown RBP12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 OR4N2Q8NGD1 307 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 OR2V1Q8NHB1 315 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 UHMK1Q8TAS1 419 aaKnown RBP12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 EFHD2Q96C19 240 aaPredicted RBP12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 ZNF681Q96N22 645 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 ERP44Q9BS26 406 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 PTGES2Q9H7Z7 377 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 GP6Q9HCN6 339 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 PSAT1Q9Y617 370 aa12.03□□□□□ -0.48
VCPKMT-201ENST00000395859 RAD51CO43502 376 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 CCNT2O60583 730 aaKnown RBP12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 BANF1O75531 89 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 LYZL6O75951 148 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 SYNGR4O95473 234 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 DHRS4L1P0CG22 281 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 EDNRAP25101 427 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 PTAFRP25105 342 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 CD40P25942 277 aa12.02□□□□□ -0.49
VCPKMT-201ENST00000395859 GIFP27352 417 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms