RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 HCFC2Q9Y5Z7 792 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 MMP2P08253 660 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 OSMP13725 252 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 FAM189BP81408 668 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 NFATC4Q14934 902 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 FAM78AQ5JUQ0 283 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CPT1CQ8TCG5 803 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 TRMT2BQ96GJ1 504 aaKnown RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 FIZ1Q96SL8 496 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 ENKD1Q9H0I2 346 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CA5BQ9Y2D0 317 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 OPN1LWP04000 364 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 PVRP15151 417 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 FUT1P19526 365 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 HOXC13P31276 330 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CSNK1A1P48729 337 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 POLR2HP52434 150 aaKnown RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 MICAQ29983 383 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 ZNF791Q3KP31 576 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 HES5Q5TA89 166 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 GSG1LQ6UXU4 331 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CFAP77Q6ZQR2 320 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CDC6Q99741 560 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 PLEKHA3Q9HB20 300 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 SACM1LQ9NTJ5 587 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CNIH4Q9P003 139 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 KLHL13Q9P2N7 655 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 DNMT3BQ9UBC3 853 aaKnown RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 RIMS3Q9UJD0 308 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 SLC35A3Q9Y2D2 325 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 ENPP4Q9Y6X5 453 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CTBSQ01459 385 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 EGFL6Q8IUX8 553 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CENPSQ8N2Z9 138 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 ATOH1Q92858 354 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 OR4K3Q96R72 315 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 NMNAT1Q9HAN9 279 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 TAS2R3Q9NYW6 316 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 KLHL9Q9P2J3 617 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 RNASET2O00584 256 aaKnown RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 DNAJB5O75953 348 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 CNR2P34972 360 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 PRKXP51817 358 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 FGL1Q08830 312 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 GALNT1Q10472 559 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 ZNF789Q5FWF6 425 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 KDELC1Q6UW63 502 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 BEST3Q8N1M1 668 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 C3orf58Q8NDZ4 430 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 USP36Q9P275 1121 aaKnown RBP9.8□□□□□ -0.84
COL4A6-203ENST00000394872 UBQLN2Q9UHD9 624 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 NUMBLQ9Y6R0 609 aa9.8□□□□□ -0.84
COL4A6-203ENST00000394872 RAD1O60671 282 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 CD46P15529 392 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 COQ5Q5HYK3 327 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 DCAF12Q5T6F0 453 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 ENDOVQ8N8Q3 282 aaKnown RBP9.79□□□□□ -0.84
COL4A6-203ENST00000394872 KDM1BQ8NB78 822 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 CSNK2A3Q8NEV1 391 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 RNF38Q9H0F5 515 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 RGCCQ9H4X1 137 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 ZCWPW2A0A1B0GU75 182 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 FXYD4P59646 89 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 GABARAPL2P60520 117 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 ERVK-16P61578 105 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 ERV3-1Q14264 604 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 EXOSC7Q15024 291 aaKnown RBP9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MPP7Q5T2T1 576 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 PXKQ7Z7A4 578 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MS4A15Q8N5U1 240 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 GLYATL2Q8WU03 294 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 TIMM29Q9BSF4 260 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 TP63Q9H3D4 680 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-203ENST00000394872 BTNL2Q9UIR0 455 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 IER3IP1Q9Y5U9 82 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 HSPE1-MOB4S4R3N1 261 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 PLSCR5A0PG75 271 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 EEF1E1-BLOC1S5C9J1V9 151 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 EN2P19622 333 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-203ENST00000394872 HTR3AP46098 478 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MZT1Q08AG7 82 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 RNASE10Q5GAN6 216 aaKnown RBP9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MANEAQ5SRI9 462 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 OR9Q2Q8NGE9 314 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 PPP1R35Q8TAP8 253 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 SFXN5Q8TD22 340 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MAFIPQ8WZ33 124 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MYADMQ96S97 322 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 PRSS21Q9Y6M0 314 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 AP1M2Q9Y6Q5 423 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 ANTXRLA6NF34 631 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 ZFAND5O76080 213 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 CDK2P24941 298 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 SNTB2Q13425 540 aaKnown RBP9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MOGSQ13724 837 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 MTFR2Q6P444 385 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 ZNF610Q8N9Z0 462 aa9.79□□□□□ -0.84
COL4A6-203ENST00000394872 SDR9C7Q8NEX9 313 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms