RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 CDC20Q12834 499 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 PRICKLE4Q2TBC4 344 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 NRMQ8IXM6 262 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 TMEFF1Q8IYR6 380 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 OR9Q1Q8NGQ5 310 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 HMGB4Q8WW32 186 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 CTHRC1Q96CG8 243 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 RNFT2Q96EX2 444 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 CNPPD1Q9BV87 410 aa14.28□□□□□ -0.12
UBE2D3-207ENST00000394801 SURF4O15260 269 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 WNT4P56705 351 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 ID2Q02363 134 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 MAP4K2Q12851 820 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 DNASE1L3Q13609 305 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 MAPK14Q16539 360 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 TMEM44Q2T9K0 475 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 DCST2Q5T1A1 773 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 AADACL4Q5VUY2 407 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 ZNF620Q6ZNG0 422 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 SLC22A16Q86VW1 577 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 SFTPA2Q8IWL1 248 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 CA13Q8N1Q1 262 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 CSNK1A1LQ8N752 337 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 OR4Q3Q8NH05 313 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 TMEM255BQ8WV15 326 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 TRMT61AQ96FX7 289 aaKnown RBP14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 GDF15Q99988 308 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 ADAP2Q9NPF8 381 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 MAT2BQ9NZL9 334 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 CRNNQ9UBG3 495 aaPredicted RBP14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 GPR52Q9Y2T5 361 aa14.27□□□□□ -0.12
UBE2D3-207ENST00000394801 CENPVL1A0A0U1RR11 272 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 AK1P00568 194 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 NID1P14543 1247 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 GNSP15586 552 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 MYL12AP19105 171 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 COL19A1Q14993 1142 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 GPR68Q15743 365 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 FLYWCH1Q4VC44 716 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 CCNJQ5T5M9 372 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 LIPKQ5VXJ0 399 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 KIAA0895LQ68EN5 471 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 SHISA5Q8N114 240 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 OR5T3Q8NGG3 340 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 HOXB13Q92826 284 aaPredicted RBP14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 HPS1Q92902 700 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 RFKQ969G6 155 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 PRSS27Q9BQR3 290 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 TEX12Q9BXU0 123 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 EXOSC4Q9NPD3 245 aaKnown RBP14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 KLHL3Q9UH77 587 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 SSR3Q9UNL2 185 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 EXOSC1Q9Y3B2 195 aaKnown RBP14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 BRWD1Q9NSI6 2320 aa14.27□□□□□ -0.13
UBE2D3-207ENST00000394801 OR5K3A6NET4 321 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 WWP2O00308 870 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 STK25O00506 426 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 CELA2BP08218 269 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 ZNF24P17028 368 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 TPBGQ13641 420 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 FZD2Q14332 565 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 STEAP3Q658P3 488 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 RANBP3LQ86VV4 465 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 RNF113BQ8IZP6 322 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 BARHL1Q9BZE3 327 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 CPNE5Q9HCH3 593 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 ABCB10Q9NRK6 738 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 KCNE5Q9UJ90 142 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 SLC7A7Q9UM01 511 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 CARD8Q9Y2G2 431 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 TRAPPC13A5PLN9 417 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 TBX1O43435 398 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 FMO6PO60774 539 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 NT5EP21589 574 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 SHC2P98077 582 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 SPANXN2Q5MJ10 180 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 CLEC12AQ5QGZ9 265 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 ZNF362Q5T0B9 420 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 SLC30A6Q6NXT4 461 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 ARHGEF39Q8N4T4 335 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 ZNF485Q8NCK3 441 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 ANKRD9Q96BM1 317 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 KRCC1Q9NPI7 259 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 PCDHGB6Q9Y5F9 930 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 CDH10Q9Y6N8 788 aa14.26□□□□□ -0.13
UBE2D3-207ENST00000394801 CDHR4A6H8M9 788 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 C2CD4DB7Z1M9 353 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 CTDSP2O14595 271 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 SOX30O94993 753 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 LIMS3P0CW19 117 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 LIMS4P0CW20 117 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 GPR4P46093 362 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 RORCP51449 518 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 KCNJ8Q15842 424 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 PGGHGQ32M88 737 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 PLK5Q496M5 336 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 TAF8Q7Z7C8 310 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 OOSP2Q86WS3 158 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 COX18Q8N8Q8 333 aa14.25□□□□□ -0.13
UBE2D3-207ENST00000394801 GALNT6Q8NCL4 622 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms