RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 ZNF689Q96CS4 500 aaPredicted RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 LRR1Q96L50 414 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 EBPLQ9BY08 206 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 SLAMF7Q9NQ25 335 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 PIKFYVEQ9Y2I7 2098 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 CACNB4O00305 520 aaPredicted RBP17.68■□□□□ 0.42
HOXC6-202ENST00000394331 FFAR1O14842 300 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 LRG1P02750 347 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 IRF8Q02556 426 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 MINDY4Q4G0A6 757 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 MAMSTRQ6ZN01 415 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 HS6ST3Q8IZP7 471 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 TMIEQ8NEW7 156 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 OR6S1Q8NH40 331 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 APOBEC4Q8WW27 367 aaKnown RBP17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ASZ1Q8WWH4 475 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 C12orf66Q96MD2 445 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 TREX2Q9BQ50 279 aaPredicted RBP17.68■□□□□ 0.42
HOXC6-202ENST00000394331 SLC25A32Q9H2D1 315 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 TVP23BQ9NYZ1 205 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 CLCA2Q9UQC9 943 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 SUSD5O60279 629 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 PRAMEF4O60810 478 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 OR2A4O95047 310 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ELAVL4P26378 380 aaKnown RBP17.68■□□□□ 0.42
HOXC6-202ENST00000394331 THBS2P35442 1172 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 DGKGP49619 791 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 IDNKQ5T6J7 187 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 PRAMEF9Q5VWM5 478 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ALKAL2Q6UX46 152 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 WDR20Q8TBZ3 569 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ORAI1Q96D31 301 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ARL5BQ96KC2 179 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 CAPNS2Q96L46 248 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 OR2A7Q96R45 310 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 SORBS1Q9BX66 1292 aaKnown RBP17.68■□□□□ 0.42
HOXC6-202ENST00000394331 SEMA4CQ9C0C4 833 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 SAP130Q9H0E3 1048 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 C20orf85Q9H1P6 137 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 OR6C2Q9NZP2 312 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 MBD1Q9UIS9 605 aaPredicted RBP17.68■□□□□ 0.42
HOXC6-202ENST00000394331 HTTP42858 3142 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 KIAA1671Q9BY89 1806 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 SC5DO75845 299 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 IGFBP1P08833 259 aaPredicted RBP17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ETFAP13804 333 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 SSTP61278 116 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 PITPNAQ00169 270 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 CDK6Q00534 326 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 NDUFA9Q16795 377 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 PGBD2Q6P3X8 592 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ANKRD33Q7Z3H0 272 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 BEST4Q8NFU0 473 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 DMBX1Q8NFW5 382 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 RNFT2Q96EX2 444 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ZNF251Q9BRH9 671 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 ATG10Q9H0Y0 220 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 C1GALT1Q9NS00 363 aa17.68■□□□□ 0.42
HOXC6-202ENST00000394331 TRAV20A0A0B4J274 112 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 OR2M5A3KFT3 312 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 ECDO95905 644 aaPredicted RBP17.67■□□□□ 0.42
HOXC6-202ENST00000394331 PRMT2P55345 433 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 PFN3P60673 137 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 DCST1Q5T197 706 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 GDPD4Q6W3E5 623 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 CXorf40BQ96DE9 158 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 C11orf24Q96F05 449 aaPredicted RBP17.67■□□□□ 0.42
HOXC6-202ENST00000394331 NANSQ9NR45 359 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 MBD2Q9UBB5 411 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 VPS29Q9UBQ0 182 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 CD84Q9UIB8 345 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 ANGPT4Q9Y264 503 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 TMEM82A0PJX8 343 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 FAM227AF5H4B4 570 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 GSTZ1O43708 216 aaPredicted RBP17.67■□□□□ 0.42
HOXC6-202ENST00000394331 UBL3O95164 117 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 MAPK3P27361 379 aaPredicted RBP17.67■□□□□ 0.42
HOXC6-202ENST00000394331 RFC3P40938 356 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 EOGTQ5NDL2 527 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 COX20Q5RI15 118 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 SERPINA13PQ6UXR4 307 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 OTOP2Q7RTS6 562 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 TMEM17Q86X19 198 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 SP7Q8TDD2 431 aaPredicted RBP17.67■□□□□ 0.42
HOXC6-202ENST00000394331 TMED9Q9BVK6 235 aa17.67■□□□□ 0.42
HOXC6-202ENST00000394331 A0A1W2PRU2 124 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 CCR6P51684 374 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 DGKEP52429 567 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 FAM69AQ5T7M9 428 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 TRIM40Q6P9F5 258 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 ZC3H14Q6PJT7 736 aaKnown RBP17.66■□□□□ 0.42
HOXC6-202ENST00000394331 BAIAP2L2Q6UXY1 529 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 SLC36A4Q6YBV0 504 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 NR2C2APQ86WQ0 139 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 FAM98AQ8NCA5 519 aaKnown RBP17.66■□□□□ 0.42
HOXC6-202ENST00000394331 KAT2AQ92830 837 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 TIFAQ96CG3 184 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 FUZQ9BT04 418 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 IFT27Q9BW83 186 aa17.66■□□□□ 0.42
HOXC6-202ENST00000394331 NLGN3Q9NZ94 848 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms