RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CD48P09326 243 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 TMEM198Q66K66 360 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 RADILQ96JH8 1075 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 PWWP2AQ96N64 755 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 ALG8Q9BVK2 526 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SIRPGQ9P1W8 387 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 MROH2AA6NES4 1674 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 H7BYZ3 331 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 J3KR12 359 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 IRAK2O43187 625 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SEC14L5O43304 696 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 B4GALT4O60513 344 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 CLEC3BP05452 202 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 GSK3AP49840 483 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 ADARB1P78563 741 aaKnown RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 INTS12Q96CB8 462 aaKnown RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 ZNF608Q9ULD9 1512 aaPredicted RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 KCNK5O95279 499 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 AK1P00568 194 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 FOLR1P15328 257 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 UFM1P61960 85 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SLC14A1Q13336 389 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SERPINA11Q86U17 422 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 TXNDC5Q8NBS9 432 aaKnown RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 OR4E2Q8NGC2 313 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 OR10K1Q8NGX5 313 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 CARS2Q9HA77 564 aaKnown RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 SCPEP1Q9HB40 452 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 C1GALT1C1LP0DN25 315 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 METAP1DQ6UB28 335 aaPredicted RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 RELL2Q8NC24 303 aaPredicted RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 TMEM104Q8NE00 496 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 GIMAP1Q8WWP7 306 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SLC6A14Q9UN76 642 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 POLHQ9Y253 713 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SOCS2O14508 198 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 ITGB2P05107 769 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 AMTP48728 403 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 TAF10Q12962 218 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 STEAP2Q8NFT2 490 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SYNPRQ8TBG9 265 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 TMEM18Q96B42 140 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 GGT1P19440 569 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 XYLT1Q86Y38 959 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 ZBTB8AQ96BR9 441 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 SAT2Q96F10 170 aaPredicted RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 SLC41A2Q96JW4 573 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 TACR2P21452 398 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 DTYMKP23919 212 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 LCN6P62502 163 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 MPEG1Q2M385 716 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 CELF3Q5SZQ8 465 aaKnown RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 THOC6Q86W42 341 aaKnown RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 GPR137CQ8N3F9 429 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 OR5L1Q8NGL2 311 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 LMX1AQ8TE12 382 aa12.75□□□□□ -0.37
USP49-203ENST00000394253 EMID1Q96A84 441 aaPredicted RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 GBA2Q9HCG7 927 aaPredicted RBP12.75□□□□□ -0.37
USP49-203ENST00000394253 ADRB2P07550 413 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 ANXA7P20073 488 aaKnown RBP12.74□□□□□ -0.37
USP49-203ENST00000394253 IGFBP4P22692 258 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 GIFP27352 417 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 OR1E2P47887 323 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 CRYBB1P53674 252 aaPredicted RBP12.74□□□□□ -0.37
USP49-203ENST00000394253 CNN3Q15417 329 aaKnown RBP12.74□□□□□ -0.37
USP49-203ENST00000394253 SBSNQ6UWP8 590 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 ABHD12BQ7Z5M8 362 aaPredicted RBP12.74□□□□□ -0.37
USP49-203ENST00000394253 PRR18Q8N4B5 295 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 MCOLN1Q9GZU1 580 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 ANKMY1Q9P2S6 941 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 IL36AQ9UHA7 158 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 ARL2-SNX15V9GYD0 113 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 DLC1Q96QB1 1528 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 ZDBF2Q9HCK1 2354 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 XKRY2A2RUG3 117 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 FBXO24O75426 580 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 EBLN1P0CF75 366 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 ADORA3P0DMS8 318 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 CT45A10P0DMU9 189 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 HTR3AP46098 478 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 AKR1C1Q04828 323 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 CTSL3PQ5NE16 218 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 LCN10Q6JVE6 187 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 OR5W2Q8NH69 310 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 MAP3K3Q99759 626 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 CNTNAP4Q9C0A0 1308 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 NPIPA5A0A0B4J1W7 369 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 ARPC1BO15143 372 aaKnown RBP12.74□□□□□ -0.37
USP49-203ENST00000394253 SRPX2O60687 465 aaPredicted RBP12.74□□□□□ -0.37
USP49-203ENST00000394253 ICMTO60725 284 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 FABP1P07148 127 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 M6PRP20645 277 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 RHBDL3P58872 404 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 IQCJQ1A5X6 159 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 DHRS11Q6UWP2 260 aa12.74□□□□□ -0.37
USP49-203ENST00000394253 UNC5DQ6UXZ4 953 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms