RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 GGNQ86UU5 652 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 ZNF610Q8N9Z0 462 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 PIK3IP1Q96FE7 263 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 CCL19Q99731 98 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 TBL1XR1Q9BZK7 514 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 GSX2Q9BZM3 304 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 IQCGQ9H095 443 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 RRAGDQ9NQL2 400 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 FLRT3Q9NZU0 649 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 NTMQ9P121 344 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 PROCRQ9UNN8 238 aa15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 RAI1Q7Z5J4 1906 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-202ENST00000394082 ALG1L2C9J202 215 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 H3BML4 177 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 SEC14L5O43304 696 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 UTS2O95399 124 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 ANGPTL1O95841 491 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 LCN1P31025 176 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 KCNJ5P48544 419 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 SIRPAP78324 504 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 KIAA0040Q15053 153 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 VPS26BQ4G0F5 336 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 MARCH3Q86UD3 253 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 HOMEZQ8IX15 550 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 OR6K3Q8NGY3 331 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 MZB1Q8WU39 189 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 IGFBPL1Q8WX77 278 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 GMPPAQ96IJ6 420 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 C16orf45Q96MC5 204 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 OR10A4Q9H209 315 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 FANCFQ9NPI8 374 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 GLRX2Q9NS18 164 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 PSMC3IPQ9P2W1 217 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 CCL27Q9Y4X3 112 aa15.71■□□□□ 0.11
SNRPA1-202ENST00000394082 PCNX3Q9H6A9 2034 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 G3V2L1 256 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 TBX19O60806 448 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 NKX2-2O95096 273 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 PYGBP11216 843 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 GABRA3P34903 492 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 DNAJB13P59910 316 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 STX5Q13190 355 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 SGCBQ16585 318 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 APOOLQ6UXV4 268 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 ZYG11AQ6WRX3 759 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 RNF165Q6ZSG1 346 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 FRMD7Q6ZUT3 714 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 CEP70Q8NHQ1 597 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 PPP1R14CQ8TAE6 165 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 ACTRT2Q8TDY3 377 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 UBTD1Q9HAC8 227 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 EMCNQ9ULC0 261 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 EMC9Q9Y3B6 208 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 FN1P02751 2386 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 ZANQ9Y493 2812 aa15.7■□□□□ 0.1
SNRPA1-202ENST00000394082 ADAMDEC1O15204 470 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 SS18L1O75177 396 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 GLRA3O75311 464 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 AQP8O94778 261 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 LY6G6DO95868 133 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 UROSP10746 265 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 MYL2P10916 166 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 PRPS2P11908 318 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 NR1H2P55055 460 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 SLC29A2Q14542 456 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 BEX5Q5H9J7 111 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 SH2D5Q6ZV89 423 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 YTHDF3Q7Z739 585 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 WDR75Q8IWA0 830 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 GTPBP8Q8N3Z3 284 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 CCNYL1Q8N7R7 359 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 CDRT4Q8N9R6 151 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 OR5M1Q8NGP8 315 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 CDC26Q8NHZ8 85 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 FAM110BQ8TC76 370 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 ZBTB8AQ96BR9 441 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 ADGRG7Q96K78 797 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 HS3ST6Q96QI5 342 aa15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 POLR3HQ9Y535 204 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-202ENST00000394082 DSCAMO60469 2012 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 GOLGA8RI6L899 631 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 KLF4O43474 513 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 IGKV1D-16P01601 117 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 FRKP42685 505 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 RAC1P63000 192 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 GRAMD1BQ3KR37 738 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 CCDC153Q494R4 210 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 ZCCHC12Q6PEW1 402 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 C22orf34Q6ZV56 151 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 Q71RC1 249 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 ZNF550Q7Z398 422 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 MISPQ8IVT2 679 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 IFT20Q8IY31 132 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 FCRL1Q96LA6 429 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 Q96MF0 132 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 TXLNGYQ9BZA5 131 aa15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 MCTS1Q9ULC4 181 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-202ENST00000394082 H7C1Q1 480 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 SLC28A1O00337 649 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms