RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 DUSP19Q8WTR2 217 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 TESCQ96BS2 214 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 SARAFQ96BY9 339 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 SDCCAG3Q96C92 435 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ARSGQ96EG1 525 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 SH3YL1Q96HL8 342 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC35G5Q96KT7 338 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 C7orf26Q96N11 449 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR7D2Q96RA2 312 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 TIMP4Q99727 224 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 VKORC1Q9BQB6 163 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 BTBD2Q9BX70 525 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 ACTRT3Q9BYD9 372 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 TBL1XR1Q9BZK7 514 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR2B2Q9GZK3 357 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 PIGUQ9H490 435 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 NEUROD4Q9HD90 331 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM120CQ9NX05 1096 aaKnown RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 QPCTLQ9NXS2 382 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 TAS2R10Q9NYW0 307 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAF1Q9UNN5 650 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 CAMK2AQ9UQM7 478 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 HIVEP3Q5T1R4 2406 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 DOPEY2Q9Y3R5 2298 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 EML6Q6ZMW3 1958 aa6.97□□□□□ -1.29
HMGB3P1-201ENST00000393368 DOPEY1Q5JWR5 2465 aa6.96□□□□□ -1.29
HMGB3P1-201ENST00000393368 SVILO95425 2214 aa6.96□□□□□ -1.29
HMGB3P1-201ENST00000393368 POLEQ07864 2286 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 A0A0G2JNJ9 132 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 CENPVL1A0A0U1RR11 272 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 PRSS51A0A1B0GVH4 220 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 NKX2-6A6NCS4 301 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 FIGNL2A6NMB9 653 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLCO1B7G3V0H7 640 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 H0YC42 278 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 OIP5O43482 229 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZIC3O60481 467 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC22A3O75751 556 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 CBR3O75828 277 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 PGRP06401 933 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SNRPB2P08579 225 aaKnown RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 HK1P19367 917 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 MATN1P21941 496 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 DPP4P27487 766 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 DCTP40126 519 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SMSP52788 366 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLNS1AP54105 237 aaKnown RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 PSMD4P55036 377 aaKnown RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 AQP5P55064 265 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 TPD52P55327 224 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 PSPHP78330 225 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SRYQ05066 204 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SF3A3Q12874 501 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 CD226Q15762 336 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 GTDC1Q4AE62 458 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 TIGD2Q4W5G0 525 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 PDCD4Q53EL6 469 aaKnown RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 C1orf185Q5T7R7 199 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 ANXA8L1Q5VT79 327 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 MTFR2Q6P444 385 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZCCHC12Q6PEW1 402 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 ARSKQ6UWY0 536 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 B3GNT6Q6ZMB0 384 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 THSD4Q6ZMP0 1018 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SEM1Q6ZVN7 128 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 IFNEQ86WN2 208 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 LRRC34Q8IZ02 419 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 NATD1Q8N6N6 113 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 FADS6Q8N9I5 356 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 OR10Q1Q8NGQ4 319 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 RFWD2Q8NHY2 731 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 PHF10Q8WUB8 498 aaKnown RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 CKAP2Q8WWK9 683 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 RAB8BQ92930 207 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 ABTB1Q969K4 478 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 VPS33AQ96AX1 596 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 WDYHV1Q96HA8 205 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 MAGEB18Q96M61 343 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SFXN2Q96NB2 322 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 OR52E6Q96RD3 313 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 STACQ99469 402 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZBTB18Q99592 522 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 NPAS1Q99742 590 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC35A5Q9BS91 424 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 TTYH2Q9BSA4 534 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 UCK2Q9BZX2 261 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 OR51I1Q9H343 314 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 DUSP22Q9NRW4 184 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC6A13Q9NSD5 602 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 Q9UFV3 132 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 MRTO4Q9UKD2 239 aaKnown RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 PCDHGB4Q9UN71 923 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 ABCG2Q9UNQ0 655 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 RNF6Q9Y252 685 aa6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 RP1L1Q8IWN7 2480 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P1-201ENST00000393368 PRAMEF27A3QJZ7 478 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 CCDC154A6NI56 674 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 TTC36A6NLP5 189 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms