RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 SIAH3Q8IW03 269 aa10.66□□□□□ -0.7
PDCD4-202ENST00000393104 OR52N1Q8NH53 320 aa10.66□□□□□ -0.7
PDCD4-202ENST00000393104 SMAP2Q8WU79 429 aaPredicted RBP10.66□□□□□ -0.7
PDCD4-202ENST00000393104 HINT3Q9NQE9 182 aaKnown RBP10.66□□□□□ -0.7
PDCD4-202ENST00000393104 CA10Q9NS85 328 aa10.66□□□□□ -0.7
PDCD4-202ENST00000393104 ING1Q9UK53 422 aaPredicted RBP10.66□□□□□ -0.7
PDCD4-202ENST00000393104 EXOSC1Q9Y3B2 195 aaKnown RBP10.66□□□□□ -0.7
PDCD4-202ENST00000393104 ASB4Q9Y574 426 aa10.66□□□□□ -0.7
PDCD4-202ENST00000393104 MYO10Q9HD67 2058 aa10.66□□□□□ -0.7
PDCD4-202ENST00000393104 DOCK9Q9BZ29 2069 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 EEF1E1O43324 174 aaKnown RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 CXCL14O95715 111 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 TMCO2Q7Z6W1 182 aaPredicted RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 C11orf96Q7Z7L8 435 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 TMEM99Q8N816 258 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 UXS1Q8NBZ7 420 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 ZBTB44Q8NCP5 570 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 AUTS2Q8WXX7 1259 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 LCORQ96JN0 433 aaPredicted RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 DDX31Q9H8H2 851 aaKnown RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 EXOSC3Q9NQT5 275 aaKnown RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 UCKL1Q9NWZ5 548 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 PRRC2BQ5JSZ5 2229 aaKnown RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 PLSCR5A0PG75 271 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 PIP5K1CO60331 668 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 MMP20O60882 483 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 FUT1P19526 365 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 MAPK9P45984 424 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 MTNR1BP49286 362 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 VSX2P58304 361 aaPredicted RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 LRRC28Q86X40 367 aaPredicted RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 NKAIN4Q8IVV8 208 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 HS6ST3Q8IZP7 471 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 PMEPA1Q969W9 287 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 CXorf58Q96LI9 332 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 PRRC1Q96M27 445 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 RASD1Q9Y272 281 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 COL4A2P08572 1712 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 SLC22A23A1A5C7 686 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 GMDSO60547 372 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 CH25HO95992 272 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 GNSP15586 552 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 TIMP2P16035 220 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 GIFP27352 417 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 RPS11P62280 158 aaKnown RBP eCLIP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 PLAURQ03405 335 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 NTRK2Q16620 822 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 CLEC12AQ5QGZ9 265 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 RTL4Q6ZR62 310 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 FAM83HQ6ZRV2 1179 aaPredicted RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 Q6ZVU0 165 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 SYT9Q86SS6 491 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 KREMEN2Q8NCW0 462 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 CHFRQ96EP1 664 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 FAM46AQ96IP4 442 aaKnown RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 IL17FQ96PD4 163 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 OR51I1Q9H343 314 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 SYNDIG1Q9H7V2 258 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 NFKBIL1Q9UBC1 381 aaPredicted RBP10.65□□□□□ -0.7
PDCD4-202ENST00000393104 FLVCR2Q9UPI3 526 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 FKBP7Q9Y680 259 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 KCNE2Q9Y6J6 123 aa10.65□□□□□ -0.7
PDCD4-202ENST00000393104 FAM183AA6NL82 134 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 A8MXK9 166 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 ARHGEF9O43307 516 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 SLC19A2O60779 497 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 ATG13O75143 517 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 RGS11O94810 467 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 LYPD3O95274 346 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 RBMS1P29558 406 aaKnown RBP10.64□□□□□ -0.71
PDCD4-202ENST00000393104 CTNNB1P35222 781 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
PDCD4-202ENST00000393104 RPA4Q13156 261 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 GRIN2CQ14957 1233 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 ZNF750Q32MQ0 723 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 SLC27A4Q6P1M0 643 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 WDR88Q6ZMY6 472 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 KANSL1Q7Z3B3 1105 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 OR5P2Q8WZ92 322 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 SMPDL3AQ92484 453 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 RFT1Q96AA3 541 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 TEFMQ96QE5 360 aaKnown RBP10.64□□□□□ -0.71
PDCD4-202ENST00000393104 F2RL3Q96RI0 385 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 ARHGDIGQ99819 225 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 GLIPR2Q9H4G4 154 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 MTG2Q9H4K7 406 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 RANBP3Q9H6Z4 567 aaPredicted RBP10.64□□□□□ -0.71
PDCD4-202ENST00000393104 BCL2L10Q9HD36 194 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 CFAP97Q9P2B7 532 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 ZFR2Q9UPR6 939 aaKnown RBP10.64□□□□□ -0.71
PDCD4-202ENST00000393104 TRANK1O15050 2925 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 IGKV1-8A0A0C4DH67 115 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 ANKDD1BA6NHY2 528 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 WASH3PC4AMC7 463 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 ATP6V1G2-DDX39BF2Z307 99 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 SH3BP5O60239 455 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 CD3GP09693 182 aa10.64□□□□□ -0.71
PDCD4-202ENST00000393104 ATP5A1P25705 553 aaKnown RBP10.64□□□□□ -0.71
PDCD4-202ENST00000393104 MAPK8P45983 427 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms