RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 KIAA0513O60268 411 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 DUSP11O75319 330 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 EPCAMP16422 314 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CRATP43155 626 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CDX1P47902 265 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 PPT1P50897 306 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 UBE2MP61081 183 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 KLC1Q07866 573 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 SHBQ15464 509 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 UBE2V2Q15819 145 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 TP53I3Q53FA7 332 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 SAPCD1Q5SSQ6 148 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PRR27Q6MZM9 219 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 TUBA3EQ6PEY2 450 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 APTXQ7Z2E3 356 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 MOB3BQ86TA1 216 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CMTM8Q8IZV2 173 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 LRRC75A-AS1Q8N1F1 130 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 Q8NA96 180 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 OR1B1Q8NGR6 318 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 OR13J1Q8NGT2 312 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NEU4Q8WWR8 484 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 ISOC2Q96AB3 205 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 DYNLL2Q96FJ2 89 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NPAS1Q99742 590 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 GINS4Q9BRT9 223 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 TM2D2Q9BX73 214 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 WWTR1Q9GZV5 400 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 SDCBP2Q9H190 292 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 Q9N2K0 584 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 EXOSC4Q9NPD3 245 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 MS4A12Q9NXJ0 267 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 STK17AQ9UEE5 414 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ZNHIT2Q9UHR6 403 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 V9GYY9 64 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NCOA3Q9Y6Q9 1424 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 G3V4G9 280 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 GAPDHSO14556 408 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 GOSR2O14653 212 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 BIRC5O15392 142 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 HLA-DRAP01903 254 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 MMP1P03956 469 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CPN2P22792 545 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 AVPR1BP47901 424 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 B2MP61769 119 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 GNG11P61952 73 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ECH1Q13011 328 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 EIF2B1Q14232 305 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 GANABQ14697 944 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 FASTKD3Q14CZ7 662 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 TMED2Q15363 201 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ZNF124Q15973 351 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 TMEM44Q2T9K0 475 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PLK5Q496M5 336 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CDKL4Q5MAI5 379 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ZNF658Q5TYW1 1059 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 RNLSQ5VYX0 342 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 C12orf54Q6X4T0 127 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 Q6ZRM9 215 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 LANCL3Q6ZV70 420 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PAPD5Q8NDF8 572 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 ZNF248Q8NDW4 579 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 DNAJC1Q96KC8 554 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 GPR137Q96N19 417 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 MICU1Q9BPX6 476 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ABCB9Q9NP78 766 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 SLC22A11Q9NSA0 550 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 USE1Q9NZ43 259 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CD274Q9NZQ7 290 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 RCC2Q9P258 522 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 FAM90A10PA6NDY2 464 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 H0YIZ8 118 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 RFXANKO14593 260 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 HDAC3O15379 428 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 UTS2O95399 124 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ELANEP08246 267 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 H2AFXP16104 143 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 PVALBP20472 110 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 EPHX2P34913 555 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PRPS1P60891 318 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PITX1P78337 314 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 TCF15Q12870 199 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 GABRA6Q16445 453 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 MLANAQ16655 118 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 RFX4Q33E94 735 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CNPY1Q3B7I2 92 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ACSM5Q6NUN0 579 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 WDR53Q7Z5U6 358 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 KMT5CQ86Y97 462 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NAGSQ8N159 534 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 BEST3Q8N1M1 668 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 OR52I1Q8NGK6 324 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PHF10Q8WUB8 498 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 ZG16BQ96DA0 208 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NDNQ99608 321 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 OR2B2Q9GZK3 357 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 SRRQ9GZT4 340 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 RAVER2Q9HCJ3 691 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 NOX4Q9NPH5 578 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PNRC2Q9NPJ4 139 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms