RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MPC2O95563 127 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 PRPS2P11908 318 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 CAPZA1P52907 286 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 REEP5Q00765 189 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 FOXK2Q01167 660 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 RAPSNQ13702 412 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 SLC46A3Q7Z3Q1 461 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 ANKRD46Q86W74 232 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 KRT78Q8N1N4 520 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 EDARADDQ8WWZ3 215 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 NSMAFQ92636 917 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 GTF3AQ92664 365 aaKnown RBP17.78■□□□□ 0.44
CCDC50-202ENST00000392456 F2RL3Q96RI0 385 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 SIGLEC11Q96RL6 698 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 MRPS30Q9NP92 439 aaKnown RBP17.78■□□□□ 0.44
CCDC50-202ENST00000392456 NEUROG3Q9Y4Z2 214 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 CEP192Q8TEP8 1941 aa17.78■□□□□ 0.44
CCDC50-202ENST00000392456 A8MXK9 166 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 ANXA4P09525 319 aaPredicted RBP17.77■□□□□ 0.44
CCDC50-202ENST00000392456 FNTBP49356 437 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 P2RY4P51582 365 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 SWI5Q1ZZU3 235 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 RHOUQ7L0Q8 258 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 SYT12Q8IV01 421 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 GHDCQ8N2G8 530 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 FLVCR1-AS1Q8TAF5 88 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 FCRL4Q96PJ5 515 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 COPS4Q9BT78 406 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 RAB11FIP5Q9BXF6 653 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 SMURF1Q9HCE7 757 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 OR6C2Q9NZP2 312 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 MLXQ9UH92 298 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 ERVK-19Q9WJR5 959 aa17.77■□□□□ 0.44
CCDC50-202ENST00000392456 RUVBL1Q9Y265 456 aaKnown RBP17.77■□□□□ 0.44
CCDC50-202ENST00000392456 LOC100506127A0A0U1RQW1 187 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 TMEM82A0PJX8 343 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 ARGFXA6NJG6 315 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 H7C2Y5 167 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 BCKDKO14874 412 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 IFNA4P05014 189 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 SMIM6P0DI80 62 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 NDUFS1P28331 727 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 UBE2IP63279 158 aaKnown RBP17.77■□□□□ 0.43
CCDC50-202ENST00000392456 ACY1Q03154 408 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 PLET1Q6UQ28 207 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 STPG2Q8N412 459 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 ZNF540Q8NDQ6 660 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 ZDHHC12Q96GR4 267 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 SPACA7Q96KW9 195 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 AICDAQ9GZX7 198 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 CLEC4MQ9H2X3 399 aaPredicted RBP17.77■□□□□ 0.43
CCDC50-202ENST00000392456 RHBGQ9H310 441 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 NDRG3Q9UGV2 375 aa17.77■□□□□ 0.43
CCDC50-202ENST00000392456 GPN3Q9UHW5 284 aaPredicted RBP17.77■□□□□ 0.43
CCDC50-202ENST00000392456 EXO1Q9UQ84 846 aaKnown RBP17.77■□□□□ 0.43
CCDC50-202ENST00000392456 WRBO00258 174 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 PCDH17O14917 1159 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 YY2O15391 372 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 CBX7O95931 251 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 VIPP01282 170 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 C1QCP02747 245 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 BCL6P41182 706 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 CSTF1Q05048 431 aaKnown RBP17.76■□□□□ 0.43
CCDC50-202ENST00000392456 UGT8Q16880 541 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 PDZK1Q5T2W1 519 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 RTL4Q6ZR62 310 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 CYP4Z2PQ8N1L4 340 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 OR10G6Q8NH81 332 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 CEP76Q8TAP6 659 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 OR51M1Q9H341 326 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 SLAMF7Q9NQ25 335 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 OR6C74A6NCV1 312 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 ANKDD1BA6NHY2 528 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 MPTX1A8MV57 137 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 B4DGG1 531 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 PRAMEF10O60809 474 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 SDC3O75056 442 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 CCNDBP1O95273 360 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 IGHV2-70P01814 119 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 KLK1P06870 262 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 EFNA1P20827 205 aaPredicted RBP17.76■□□□□ 0.43
CCDC50-202ENST00000392456 HRH2P25021 359 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 SAXO2Q658L1 398 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 ERICH5Q6P6B1 374 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 CHMP1BQ7LBR1 199 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 FCGR1BQ92637 280 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 TCEAL3Q969E4 200 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 UBE2E3Q969T4 207 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 OR52E6Q96RD3 313 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 RBM4BQ9BQ04 359 aaKnown RBP17.76■□□□□ 0.43
CCDC50-202ENST00000392456 RBM4Q9BWF3 364 aaKnown RBP17.76■□□□□ 0.43
CCDC50-202ENST00000392456 ZFP64Q9NPA5 681 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 TMEM45AQ9NWC5 275 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 VAPAQ9P0L0 249 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 AASSQ9UDR5 926 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 PURGQ9UJV8 347 aaKnown RBP17.76■□□□□ 0.43
CCDC50-202ENST00000392456 C3orf18Q9UK00 162 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 ING4Q9UNL4 249 aa17.76■□□□□ 0.43
CCDC50-202ENST00000392456 MDC1Q14676 2089 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms