RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RAC1P63000 192 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF266Q14584 549 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 EIF4HQ15056 248 aaKnown RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 ODF4Q2M2E3 257 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PAQR3Q6TCH7 311 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF679Q8IYX0 411 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PLPP5Q8NEB5 264 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 UHRF1Q96T88 793 aaPredicted RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF416Q9BWM5 594 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 TXNL4BQ9NX01 149 aaKnown RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 SUSD2Q9UGT4 822 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 NPFFR2Q9Y5X5 522 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 C3P01024 1663 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 FBLP22087 321 aaKnown RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 ETV1P50549 477 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 UBE2KP61086 200 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 CST9LP1Q5W188 147 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 NT5C3BQ969T7 300 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PTERQ96BW5 349 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 FBXL12Q9NXK8 326 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 FOXE1O00358 373 aaPredicted RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 CH25HO95992 272 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PTGER4P35408 488 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PBX1P40424 430 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 HNF4GQ14541 408 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 TRMT10BQ6PF06 316 aaKnown RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 LCTLQ6UWM7 567 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 TSPYL5Q86VY4 417 aaPredicted RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 DBF4BQ8NFT6 615 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PCDHB10Q9UN67 800 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF536O15090 1300 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 NPIPA5A0A0B4J1W7 369 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 TMEM225BP0DP42 221 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 HNRNPFP52597 415 aaKnown RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 TMEM71Q6P5X7 295 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 SSX9Q7RTT3 188 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 C1orf52Q8N6N3 182 aaKnown RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 FRS2Q8WU20 508 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 CANT1Q8WVQ1 401 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 DCLRE1CQ96SD1 692 aaKnown RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 KATNB1Q9BVA0 655 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 FBRSQ9HAH7 460 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 TOXO94900 526 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PROS1P07225 676 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PTGIRP43119 386 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 MTNR1AP48039 350 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 GSK3BP49841 420 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 FAM69BQ5VUD6 431 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 NKX3-1Q99801 234 aaPredicted RBP14□□□□□ -0.17
CCDC50-201ENST00000392455 ZCCHC4Q9H5U6 513 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 DUSP22Q9NRW4 184 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 TAC3Q9UHF0 121 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 ADAM29Q9UKF5 820 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 EEF1E1-BLOC1S5C9J1V9 151 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 EPOP01588 193 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 IGHEP01854 428 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 CSF2P04141 144 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 MAP4K2Q12851 820 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 ENPP6Q6UWR7 440 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 CLEC20AQ6ZU45 233 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 PRSS48Q7RTY5 328 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 OR6F1Q8NGZ6 308 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 FAM96BQ9Y3D0 163 aa14□□□□□ -0.17
CCDC50-201ENST00000392455 TRAF3IP2O43734 574 aaPredicted RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 CSN1S1P47710 185 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 TAS2R19P59542 299 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 RPS21P63220 83 aaKnown RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 PCGF3Q3KNV8 242 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 RBMXL3Q8N7X1 1067 aaKnown RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 ABHD11Q8NFV4 315 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 MUL1Q969V5 352 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 SMLR1H3BR10 107 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 K7EPK0 472 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 ARHGEF15O94989 841 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 F7P08709 466 aaPredicted RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 SNHG28P0DPA3 235 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 CPXM2Q8N436 756 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 FAM71E2Q8N5Q1 922 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 TESQ9UGI8 421 aaKnown RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 PPM1HQ9ULR3 514 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 ERVK-25P63136 954 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 ATPAF1Q5TC12 328 aaPredicted RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 CCBE1Q6UXH8 406 aaPredicted RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 UEVLDQ8IX04 471 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 LMX1AQ8TE12 382 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 CD244Q9BZW8 370 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 AMBNQ9NP70 447 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 PHLPP1O60346 1717 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 SERPINA5P05154 406 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 ADORA3P0DMS8 318 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 PRDX3P30048 256 aaKnown RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 TGM4P49221 684 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 RAET1LQ5VY80 246 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 CILP2Q8IUL8 1156 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 TLCD1Q96CP7 247 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 PSD2Q9BQI7 771 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 NDFIP1Q9BT67 221 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 PITHD1Q9GZP4 211 aaPredicted RBP13.99□□□□□ -0.17
CCDC50-201ENST00000392455 ATRNL1Q5VV63 1379 aa13.99□□□□□ -0.17
CCDC50-201ENST00000392455 ADAP00813 363 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms