RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SLC38A4Q969I6 547 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 SENP5Q96HI0 755 aaPredicted RBP10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 GFM1Q96RP9 751 aaKnown RBP10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 G6PC3Q9BUM1 346 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 ITPAQ9BY32 194 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC7A5P2Q9GIP4 190 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 SEMA4GQ9NTN9 838 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 REV1Q9UBZ9 1251 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 FTSJ1Q9UET6 329 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 IGLV3-12A0A075B6K2 115 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 NPIPA5A0A0B4J1W7 369 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 NPIPA7E9PJI5 369 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 FMO6PO60774 539 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 IGKV1D-16P01601 117 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 NPIPA8P0DM63 369 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 CHMP24386 653 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 EEF1B2P24534 225 aaKnown RBP10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 EFNA3P52797 238 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 CRISP1P54107 249 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC37A1P57057 533 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 COX10Q12887 443 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 TARDBPQ13148 414 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 BROXQ5VW32 411 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 C1orf94Q6P1W5 598 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 PLEKHM3Q6ZWE6 761 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 B3GNT8Q7Z7M8 397 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 DEPDC4Q8N2C3 294 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC46A1Q96NT5 459 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 PRR14Q9BWN1 585 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 CTPS2Q9NRF8 586 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC22A11Q9NSA0 550 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 CBLCQ9ULV8 474 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 CFL2Q9Y281 166 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 PCDHGA5Q9Y5G8 931 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 CLCA3PQ9Y6N3 262 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 KMT2EQ8IZD2 1858 aa10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 ASCC3Q8N3C0 2202 aaKnown RBP10.6□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZAR1LA6NP61 321 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 D6RAR5 112 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 NPIPB9F8W1W9 429 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ABCB7O75027 752 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 SCRG1O75711 98 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 IGKV3-11P04433 115 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 HBQ1P09105 142 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 HOXC5Q00444 222 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ALDH6A1Q02252 535 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 TEKQ02763 1124 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ILKQ13418 452 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 PTGES3Q15185 160 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZNF141Q15928 474 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZSWIM7Q19AV6 140 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 DBX2Q6ZNG2 339 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 BPHLQ86WA6 291 aaPredicted RBP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 GRAMD2AQ8IUY3 354 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 PLPP5Q8NEB5 264 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 VN1R1Q9GZP7 353 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 RBM38Q9H0Z9 239 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ARRDC1-AS1Q9H2J1 176 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 SMOC1Q9H4F8 434 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 RNF6Q9Y252 685 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 PCDHGB2Q9Y5G2 931 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 A0A087WUU8 490 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 KHNYNO15037 678 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 WBP4O75554 376 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 OR6B1O95007 311 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 TIAF1O95411 115 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 DDAH2O95865 285 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ONECUT2O95948 504 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 DRD5P21918 477 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 MMP11P24347 488 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 IFNGR2P38484 337 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 PSMD4P55036 377 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 CSNK2BP67870 215 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 TRA2AQ13595 282 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 NSDHLQ15738 373 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 DECR1Q16698 335 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 LAIR1Q6GTX8 287 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 PWWP2BQ6NUJ5 590 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 GDF7Q7Z4P5 450 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZER1Q7Z7L7 766 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 BCORP1Q8N888 145 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZSCAN1Q8NBB4 408 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC38A9Q8NBW4 561 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 BPIFB6Q8NFQ5 453 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 OR14A16Q8NHC5 309 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 FAM81AQ8TBF8 368 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC2A12Q8TD20 617 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZNF721Q8TF20 911 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 APH1BQ8WW43 257 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC35B4Q969S0 331 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC41A3Q96GZ6 507 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 ART5Q96L15 291 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 CTSFQ9UBX1 484 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 TESQ9UGI8 421 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 MKL2Q9ULH7 1088 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 OR10H1Q9Y4A9 318 aa10.59□□□□□ -0.71
SMARCAL1-203ENST00000392128 THY1P04216 161 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms