RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 NUDT1P36639 197 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 GIPRP48546 466 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 BTG1P62324 171 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 PDZD3Q86UT5 571 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 KCNK12Q9HB15 430 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 IL17CQ9P0M4 197 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 ANKRD36CQ5JPF3 1778 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 H3BSH0 61 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 C3orf38Q5JPI3 329 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 SPIN3Q5JUX0 258 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 PHOSPHO1Q8TCT1 267 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 APMAPQ9HDC9 416 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 GMPR2Q9P2T1 348 aaKnown RBP18.6■□□□□ 0.57
SHANK1-203ENST00000391813 CLEC4EQ9ULY5 219 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 TIAM2Q8IVF5 1701 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 TUBG1P23258 451 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 LIPAP38571 399 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 TAS2R31P59538 309 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 OR5D16Q8NGK9 328 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 TMEM163Q8TC26 289 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 SCGB1C1Q8TD33 95 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 SLC39A13Q96H72 371 aa18.6■□□□□ 0.57
SHANK1-203ENST00000391813 MTHFD2LQ9H903 347 aaPredicted RBP18.6■□□□□ 0.57
SHANK1-203ENST00000391813 NFYAP23511 347 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-203ENST00000391813 AQP2P41181 271 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 DEFB103AP81534 67 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 TMEM164Q5U3C3 297 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 KCTD11Q693B1 232 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 CHRDL2Q6WN34 429 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ZFAND1Q8TCF1 268 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 CMKLR1Q99788 373 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 KCNJ16Q9NPI9 418 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 NRAPQ86VF7 1730 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 TCRBV5S1A1TA0A578 114 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 WASH4PA8MWX3 477 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 SLC6A9P48067 706 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 LSSP48449 732 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ARL6IP1Q15041 203 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF852Q6ZMS4 543 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ESX1Q8N693 406 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF417Q8TAU3 575 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 GIMAP1Q8WWP7 306 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 PRRC1Q96M27 445 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 RPS10P5Q9NQ39 176 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ATP6V1G2-DDX39BF2Z307 99 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 RAB40ALP0C0E4 278 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 PRSS56P0CW18 603 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 GP1BBP13224 206 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ACPPP15309 386 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 EN2P19622 333 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-203ENST00000391813 PSMB1P20618 241 aaKnown RBP18.59■□□□□ 0.57
SHANK1-203ENST00000391813 CFAP77Q6ZQR2 320 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF551Q7Z340 670 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-203ENST00000391813 NRSN1Q8IZ57 195 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF454Q8N9F8 522 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 RAB40AQ8WXH6 277 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 SCAMP4Q969E2 229 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 SAMD8Q96LT4 415 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 F2RL3Q96RI0 385 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 SAP130Q9H0E3 1048 aa18.59■□□□□ 0.57
SHANK1-203ENST00000391813 CFAP20Q9Y6A4 193 aaKnown RBP18.59■□□□□ 0.57
SHANK1-203ENST00000391813 TSTD3H0UI37 97 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 LAMTOR5O43504 91 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 MASP1P48740 699 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 IRF4Q15306 451 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 CBARPQ8N350 705 aaPredicted RBP18.58■□□□□ 0.57
SHANK1-203ENST00000391813 OR2T4Q8NH00 348 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 PMM1Q92871 262 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 SLC41A3Q96GZ6 507 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 RADILQ96JH8 1075 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 CASD1Q96PB1 797 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 NEURL2Q9BR09 285 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 SMG9Q9H0W8 520 aaKnown RBP18.58■□□□□ 0.57
SHANK1-203ENST00000391813 SLC6A5Q9Y345 797 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 AK6Q9Y3D8 172 aaKnown RBP18.58■□□□□ 0.57
SHANK1-203ENST00000391813 SPO11Q9Y5K1 396 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 GSRP00390 522 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 IFNA5P01569 189 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 AKR1C4P17516 323 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 M6PRP20645 277 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 APEX1P27695 318 aaKnown RBP18.58■□□□□ 0.57
SHANK1-203ENST00000391813 ASAH1Q13510 395 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 ENTHD1Q8IYW4 607 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 OR52E2Q8NGJ4 325 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF304Q9HCX3 659 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 HSFX1Q9UBD0 423 aa18.58■□□□□ 0.57
SHANK1-203ENST00000391813 HYKKA2RU49 373 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 MEIS3P2A8K0S8 358 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 STC2O76061 302 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 MAS1P04201 325 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 PTNP21246 168 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 NRG3P56975 720 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 NKX6-1P78426 367 aaPredicted RBP18.58■□□□□ 0.56
SHANK1-203ENST00000391813 ZXDBP98169 803 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 FCN2Q15485 313 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 HBMQ6B0K9 141 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF546Q86UE3 836 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 VRK1Q99986 396 aaPredicted RBP18.58■□□□□ 0.56
SHANK1-203ENST00000391813 TREX2Q9BQ50 279 aaPredicted RBP18.58■□□□□ 0.56
SHANK1-203ENST00000391813 FAM83CQ9BQN1 747 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms