RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 UNC5CLQ8IV45 518 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 FGFRL1Q8N441 504 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 BPIFB2Q8N4F0 458 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CLDN19Q8N6F1 224 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 C15orf54Q8N8G6 183 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF491Q8N8L2 437 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 ANKFN1Q8N957 763 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 OR10A7Q8NGE5 316 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 OSTF1Q92882 214 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 EMG1Q92979 244 aaKnown RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 TOMM40LQ969M1 308 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 C11orf24Q96F05 449 aaPredicted RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 ZBED6CLQ96FA7 236 aaPredicted RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 DHTKD1Q96HY7 919 aaPredicted RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 C18orf12Q96KH6 178 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 RPP25Q9BUL9 199 aaKnown RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CCDC28BQ9BUN5 200 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 ZBP1Q9H171 429 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 VCX2Q9H322 139 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CALHM2Q9HA72 323 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CHRNA9Q9UGM1 479 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 MAD1L1Q9Y6D9 718 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 SLCO1B1Q9Y6L6 691 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 METP08581 1390 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 A0A1W2PPR1 153 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 FAM74A7A6NL05 159 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF487B1APH4 448 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ZSCAN12O43309 604 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 MTX2O75431 263 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 UGT2B17O75795 530 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 B3GAT3O94766 335 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 GJB5O95377 273 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 IGF1P05019 195 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 SERPINB2P05120 415 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 H2BFMP0C1H6 154 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 IQCF3P0C7M6 154 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 RPS2P15880 293 aaKnown RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 XRCC1P18887 633 aaPredicted RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 TPSB2P20231 275 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 TBXA2RP21731 343 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 CA8P35219 290 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ETV5P41161 510 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 NOVA1P51513 510 aaKnown RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ARHGDIBP52566 201 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 OTUD4Q01804 1114 aaKnown RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 PLOD1Q02809 727 aaPredicted RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF33BQ06732 778 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 RGS1Q08116 209 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 CD300CQ08708 224 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 LRRC74AQ0VAA2 488 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 COX10Q12887 443 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 IL18R1Q13478 541 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 CRMP1Q14194 572 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 GANABQ14697 944 aaKnown RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 TPSAB1Q15661 275 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 LTB4RQ15722 352 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 PPP1R3AQ16821 1122 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 EXOC3L2Q2M3D2 409 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 FILIP1LQ4L180 1135 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 FAM74A3Q4VXF1 159 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 TEX44Q53QW1 395 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 NHLRC3Q5JS37 347 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 METTL11BQ5VVY1 283 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF343Q6P1L6 599 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 FAHD2BQ6P2I3 314 aaPredicted RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 PAQR6Q6TCH4 344 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ADAMTSL5Q6ZMM2 481 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 CCDC50Q8IVM0 306 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ZCCHC7Q8N3Z6 543 aaKnown RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 EIF1ADQ8N9N8 165 aaKnown RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 C17orf47Q8NEP4 570 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 RFESDQ8TAC1 157 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 NANPQ8TBE9 248 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 C18orf25Q96B23 403 aaPredicted RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF689Q96CS4 500 aaPredicted RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 FAHD2AQ96GK7 314 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 SH3YL1Q96HL8 342 aaPredicted RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ZBTB18Q99592 522 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 HCAR1Q9BXC0 346 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 DUSP16Q9BY84 665 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 CRNKL1Q9BZJ0 848 aaKnown RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 OPN3Q9H1Y3 402 aaPredicted RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ADNPQ9H2P0 1102 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 RHOJQ9H4E5 214 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 TIGARQ9NQ88 270 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 RCOR3Q9P2K3 495 aaPredicted RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 GNG12Q9UBI6 72 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 ANAPC7Q9UJX3 599 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 HPCAL4Q9UM19 191 aa2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 SAMD4AQ9UPU9 718 aaKnown RBP2.35□□□□□ -2.03
TRAJ40-201ENST00000390497 IGKV3D-15A0A087WSY6 115 aa2.34□□□□□ -2.03
TRAJ40-201ENST00000390497 FAM240BA0A1B0GVZ2 78 aa2.34□□□□□ -2.03
TRAJ40-201ENST00000390497 ZSCAN5CA6NGD5 496 aaPredicted RBP2.34□□□□□ -2.03
TRAJ40-201ENST00000390497 FAM220BPB1ANY3 271 aa2.34□□□□□ -2.03
TRAJ40-201ENST00000390497 E9PAM4 449 aa2.34□□□□□ -2.03
TRAJ40-201ENST00000390497 G3V3Y1 287 aa2.34□□□□□ -2.03
TRAJ40-201ENST00000390497 BTN3A3O00478 584 aa2.34□□□□□ -2.03
TRAJ40-201ENST00000390497 ARPC3O15145 178 aa2.34□□□□□ -2.03
TRAJ40-201ENST00000390497 STX7O15400 261 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms