RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 RPS25P62851 125 aaKnown RBP13.94□□□□□ -0.18
SCFD2-201ENST00000388940 DSG2Q14126 1118 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 CLEC12AQ5QGZ9 265 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 MANEAQ5SRI9 462 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 NXNL2Q5VZ03 156 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 SLC30A6Q6NXT4 461 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 ZCCHC12Q6PEW1 402 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 AKAP14Q86UN6 197 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 LAX1Q8IWV1 398 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 IL17RDQ8NFM7 739 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 TMEM255BQ8WV15 326 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 PMM1Q92871 262 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 EFHD2Q96C19 240 aaPredicted RBP13.94□□□□□ -0.18
SCFD2-201ENST00000388940 COQ7Q99807 217 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 SRRQ9GZT4 340 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 S1PR5Q9H228 398 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 MUTYHQ9UIF7 546 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 GSTK1Q9Y2Q3 226 aa13.94□□□□□ -0.18
SCFD2-201ENST00000388940 TRBV23OR9-2A0A075B6M9 112 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 TRDV1A0A1B0GX56 115 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 PLOD3O60568 738 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 DNAJB6O75190 326 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 RASGRP1O95267 797 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 IGHA1P01876 353 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 ATP1B1P05026 303 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 DBIP07108 87 aaKnown RBP13.93□□□□□ -0.18
SCFD2-201ENST00000388940 NDUFV2P19404 249 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 HTR1FP30939 366 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 SRP54P61011 504 aaKnown RBP13.93□□□□□ -0.18
SCFD2-201ENST00000388940 CAMK2BQ13554 666 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 ZNF79Q15937 498 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 GLYR1Q49A26 553 aaPredicted RBP13.93□□□□□ -0.18
SCFD2-201ENST00000388940 RANBP3LQ86VV4 465 aaPredicted RBP13.93□□□□□ -0.18
SCFD2-201ENST00000388940 OR4N5Q8IXE1 308 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 RNF113BQ8IZP6 322 aaKnown RBP13.93□□□□□ -0.18
SCFD2-201ENST00000388940 ZNF619Q8N2I2 560 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 OR2T33Q8NG76 320 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 C1GALT1C1Q96EU7 318 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 MRGPRX1Q96LB2 322 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 ZFYVE21Q9BQ24 234 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 ZNF649Q9BS31 505 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 NKX2-4Q9H2Z4 354 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 IL21RQ9HBE5 538 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 DUSP22Q9NRW4 184 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 C14orf119Q9NWQ9 140 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 NPAP1Q9NZP6 1156 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 SLC7A7Q9UM01 511 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 ENTPD2Q9Y5L3 495 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 C5orf42Q9H799 3197 aa13.93□□□□□ -0.18
SCFD2-201ENST00000388940 OR6C74A6NCV1 312 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 PIP5K1CO60331 668 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 APOL3O95236 402 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 POLR2CP19387 275 aaPredicted RBP13.92□□□□□ -0.18
SCFD2-201ENST00000388940 GPR4P46093 362 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 GPR18Q14330 331 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 CRTC2Q53ET0 693 aaPredicted RBP13.92□□□□□ -0.18
SCFD2-201ENST00000388940 TRMT12Q53H54 448 aaKnown RBP13.92□□□□□ -0.18
SCFD2-201ENST00000388940 OR8H2Q8N162 312 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 PSD4Q8NDX1 1056 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 SIMC1Q8NDZ2 872 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 OR52N1Q8NH53 320 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 BRIX1Q8TDN6 353 aaKnown RBP13.92□□□□□ -0.18
SCFD2-201ENST00000388940 TMEM203Q969S6 136 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 STACQ99469 402 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 PRSS27Q9BQR3 290 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 TPK1Q9H3S4 243 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 GRIP1Q9Y3R0 1128 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 LOC105369274A0A096LPK9 316 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 LOC102723532A0A0G2JNH3 316 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 TRAPPC13A5PLN9 417 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 FAM221BA6H8Z2 402 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 CHST10O43529 356 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 NDUFB5O43674 189 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 FMO6PO60774 539 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 STX11O75558 287 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 MRPS21P82921 87 aaKnown RBP13.92□□□□□ -0.18
SCFD2-201ENST00000388940 MXD1Q05195 221 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 HNRNPA0Q13151 305 aaKnown RBP13.92□□□□□ -0.18
SCFD2-201ENST00000388940 XKRXQ6PP77 449 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 OR4N4Q8N0Y3 316 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 CDRT4Q8N9R6 151 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 AP3S1Q92572 193 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 MIXL1Q9H2W2 232 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 ZNF223Q9UK11 482 aaPredicted RBP13.92□□□□□ -0.18
SCFD2-201ENST00000388940 CBLCQ9ULV8 474 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 SPACA6W5XKT8 324 aa13.92□□□□□ -0.18
SCFD2-201ENST00000388940 ARHGEF17Q96PE2 2063 aaPredicted RBP13.92□□□□□ -0.18
SCFD2-201ENST00000388940 H0YGG7 62 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 DYRK3O43781 588 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 CH25HO95992 272 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 AK1P00568 194 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 CLEC2LP0C7M8 214 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 ACSL1P33121 698 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 SDC2P34741 201 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 MAP3K8P41279 467 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 ARF3P61204 181 aaPredicted RBP13.91□□□□□ -0.18
SCFD2-201ENST00000388940 FABP5Q01469 135 aa13.91□□□□□ -0.18
SCFD2-201ENST00000388940 ZNF155Q12901 538 aaPredicted RBP13.91□□□□□ -0.18
SCFD2-201ENST00000388940 TCEA2Q15560 299 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms