RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 SLC18B1Q6NT16 456 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 DPY19L2P1Q6NXN4 242 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 TMEM150AQ86TG1 271 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 OR9Q2Q8NGE9 314 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 MMABQ96EY8 250 aaPredicted RBP13.22□□□□□ -0.29
SNPH-201ENST00000381867 SYT3Q9BQG1 590 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 THAP7Q9BT49 309 aaPredicted RBP13.22□□□□□ -0.29
SNPH-201ENST00000381867 ITGAMP11215 1152 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 GGT2P36268 569 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 HTR6P50406 440 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 RNF144AP50876 292 aaPredicted RBP13.22□□□□□ -0.29
SNPH-201ENST00000381867 TAS2R38P59533 333 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 TAS2R31P59538 309 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 MCCD1P59942 119 aaPredicted RBP13.22□□□□□ -0.29
SNPH-201ENST00000381867 MRPS10P82664 201 aaKnown RBP13.22□□□□□ -0.29
SNPH-201ENST00000381867 MC2RQ01718 297 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 PLP2Q04941 152 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 RGNQ15493 299 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 TMEM35AQ53FP2 167 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 PAGE3Q5JUK9 113 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 C3P1Q6ZMU1 363 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 DCP2Q8IU60 420 aaKnown RBP13.22□□□□□ -0.29
SNPH-201ENST00000381867 FAM109AQ8N4B1 249 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 MAL2Q969L2 176 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 ALG8Q9BVK2 526 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 ZBP1Q9H171 429 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 LAMP1P11279 417 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 SOX3P41225 446 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 C1orf61Q13536 156 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 GPR19Q15760 415 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 CATSPEREQ5SY80 951 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 ARHGAP12Q8IWW6 846 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 NRMQ8IXM6 262 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 OR7G1Q8NGA0 311 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 MALSU1Q96EH3 234 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 SYNPO2LQ9H987 977 aa13.22□□□□□ -0.29
SNPH-201ENST00000381867 FGF4P08620 206 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 RGS6P49758 472 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 ARSDP51689 593 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 FAM205BPQ63HN1 556 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 UNC5DQ6UXZ4 953 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 GLYATL2Q8WU03 294 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 NT5DC2Q9H857 520 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 ARPC1BO15143 372 aaKnown RBP13.21□□□□□ -0.29
SNPH-201ENST00000381867 CDK1P06493 297 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 SELENOWP63302 87 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 GALEQ14376 348 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 ARL6IP1Q15041 203 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 HACD4Q5VWC8 232 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 KIAA1211LQ6NV74 962 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 OR4K13Q8NH42 304 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 GAB3Q8WWW8 586 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 FAM3CQ92520 227 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 NT5C3BQ969T7 300 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 ZNF689Q96CS4 500 aaPredicted RBP13.21□□□□□ -0.29
SNPH-201ENST00000381867 SLC41A3Q96GZ6 507 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 FN3KQ9H479 309 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 NPIPA2E9PIF3 369 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 NPIPA3F8WFD2 350 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 ATE1O95260 518 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 MAGEA6P43360 314 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 NKX3-2P78367 333 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 TAP2Q03519 686 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 GTDC1Q4AE62 458 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 LEG1Q6P5S2 330 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 TMEM25Q86YD3 366 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 FAM174AQ8TBP5 190 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 C16orf78Q8WTQ4 265 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 ZNF778Q96MU6 729 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 THSD1Q9NS62 852 aa13.21□□□□□ -0.29
SNPH-201ENST00000381867 ZCWPW2A0A1B0GU75 182 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 A0A1W2PQU0 124 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 MEGF11A6BM72 1044 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 ACOT7O00154 380 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 CD70P32970 193 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 VIPR2P41587 438 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 RABIFP47224 123 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 VSX2P58304 361 aaPredicted RBP13.21□□□□□ -0.3
SNPH-201ENST00000381867 OR4C11Q6IEV9 310 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 SORT1Q99523 831 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 INPP5KQ9BT40 448 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 ZNF442Q9H7R0 627 aa13.21□□□□□ -0.3
SNPH-201ENST00000381867 DCAF13Q9NV06 445 aaKnown RBP13.21□□□□□ -0.3
SNPH-201ENST00000381867 TCRBV3S1A0A5B6 114 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 CEBPBP17676 345 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 PGCP20142 388 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 PCGF2P35227 344 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 CASP6P55212 293 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 CXCR4P61073 352 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 ZNF33BQ06732 778 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 VEZF1Q14119 521 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 CGB2Q6NT52 195 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 TTC9BQ8N6N2 239 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 OR5W2Q8NH69 310 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 HERPUD2Q9BSE4 406 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 ZNF175Q9Y473 711 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 PRAMEF2O60811 474 aa13.2□□□□□ -0.3
SNPH-201ENST00000381867 ZNF254O75437 659 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms