RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SLC36A4Q6YBV0 504 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 GALNT12Q8IXK2 581 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 SLC15A4Q8N697 577 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 SIMC1Q8NDZ2 872 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 SLC35B4Q969S0 331 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 DCSTAMPQ9H295 470 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 IL20Q9NYY1 176 aa21.49■■□□□ 1.03
VPS16-201ENST00000380443 TESQ9UGI8 421 aaKnown RBP21.49■■□□□ 1.03
VPS16-201ENST00000380443 DIMT1Q9UNQ2 313 aaKnown RBP21.49■■□□□ 1.03
VPS16-201ENST00000380443 CCRL2O00421 344 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 KLF4O43474 513 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 HCRTR1O43613 425 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 PRKYO43930 277 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 CBX7O95931 251 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 GABRA3P34903 492 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 SYT14P1Q58G82 188 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 GDPGP1Q6ZNW5 385 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 CARFQ8N187 725 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 MAP3K3Q99759 626 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 PELOQ9BRX2 385 aaKnown RBP21.48■■□□□ 1.03
VPS16-201ENST00000380443 TMEM131Q92545 1883 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 CDHR4A6H8M9 788 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 TLCD2A6NGC4 264 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 PRODHO43272 600 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 AQP9O43315 295 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 CT62P0C5K7 136 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 GALNSP34059 522 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 LIMK1P53667 647 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 ZNF155Q12901 538 aaPredicted RBP21.48■■□□□ 1.03
VPS16-201ENST00000380443 MED22Q15528 200 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 DEFB110Q30KQ9 67 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 NKAIN4Q8IVV8 208 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 SPEM1Q8N4L4 309 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 IQCF1Q8N6M8 205 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 AMER2Q8N7J2 671 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 OR6Q1Q8NGQ2 317 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 RPL3LQ92901 407 aaKnown RBP21.48■■□□□ 1.03
VPS16-201ENST00000380443 RBM18Q96H35 190 aaKnown RBP21.48■■□□□ 1.03
VPS16-201ENST00000380443 ZNF582Q96NG8 517 aaPredicted RBP21.48■■□□□ 1.03
VPS16-201ENST00000380443 PRR14Q9BWN1 585 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 MMP27Q9H306 513 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 AKIP1Q9NQ31 210 aa21.48■■□□□ 1.03
VPS16-201ENST00000380443 FOXS1O43638 330 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 SCG5P05408 212 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 OPRL1P41146 370 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 GABRA4P48169 554 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 NXPH1P58417 271 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 STX4Q12846 297 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 C1DQ13901 141 aaKnown RBP21.47■■□□□ 1.03
VPS16-201ENST00000380443 EXOSC7Q15024 291 aaKnown RBP21.47■■□□□ 1.03
VPS16-201ENST00000380443 BMP8AQ7Z5Y6 402 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 NANOGP1Q8N7R0 232 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 OR52R1Q8NGF1 315 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 PIK3R3Q92569 461 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 ZDHHC12Q96GR4 267 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 FAM46AQ96IP4 442 aaKnown RBP21.47■■□□□ 1.03
VPS16-201ENST00000380443 LRR1Q96L50 414 aa21.47■■□□□ 1.03
VPS16-201ENST00000380443 SLIRPQ9GZT3 109 aaKnown RBP21.47■■□□□ 1.03
VPS16-201ENST00000380443 LSM2Q9Y333 95 aaKnown RBP21.47■■□□□ 1.03
VPS16-201ENST00000380443 CUL9Q8IWT3 2517 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 A0A0A6YYC8 382 aaPredicted RBP21.46■■□□□ 1.03
VPS16-201ENST00000380443 H0YIG0 161 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 I3L1I5 382 aaPredicted RBP21.46■■□□□ 1.03
VPS16-201ENST00000380443 STK25O00506 426 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 RAB36O95755 333 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 HMGN1P05114 100 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 S1PR1P21453 382 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 RAB40BQ12829 278 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 CCNJQ5T5M9 372 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 MRPL2Q5T653 305 aaKnown RBP21.46■■□□□ 1.03
VPS16-201ENST00000380443 GRAMD2AQ8IUY3 354 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 C7orf57Q8NEG2 295 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 RIT1Q92963 219 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 RFKQ969G6 155 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 SPACA7Q96KW9 195 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 ZNF559Q9BR84 538 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 PDE7BQ9NP56 450 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 FGF20Q9NP95 211 aaPredicted RBP21.46■■□□□ 1.03
VPS16-201ENST00000380443 PRTFDC1Q9NRG1 225 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 ENAMQ9NRM1 1142 aa21.46■■□□□ 1.03
VPS16-201ENST00000380443 CCDC59Q9P031 241 aaKnown RBP21.46■■□□□ 1.03
VPS16-201ENST00000380443 FITM1A5D6W6 292 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 THY1P04216 161 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 ENDOUP21128 410 aaKnown RBP21.45■■□□□ 1.03
VPS16-201ENST00000380443 MLLT3P42568 568 aaPredicted RBP21.45■■□□□ 1.03
VPS16-201ENST00000380443 HSD17B7P56937 341 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 LSM11P83369 360 aaKnown RBP eCLIP21.45■■□□□ 1.032e-6■■■■□ 23.2
VPS16-201ENST00000380443 RPL6Q02878 288 aaKnown RBP21.45■■□□□ 1.03
VPS16-201ENST00000380443 SLC13A2Q13183 592 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 SPHARQ15513 63 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 MAPK14Q16539 360 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 C14orf28Q4W4Y0 310 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 C3orf38Q5JPI3 329 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 SLC34A3Q8N130 599 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 TAPBPLQ9BX59 468 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 EGLN3Q9H6Z9 239 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 SLC7A7Q9UM01 511 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 TMEM5Q9Y2B1 443 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 CDH10Q9Y6N8 788 aa21.45■■□□□ 1.03
VPS16-201ENST00000380443 PRR33A8MZF0 331 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms