RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 NPAS3Q8IXF0 933 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 SCAMP5Q8TAC9 235 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 SGTBQ96EQ0 304 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 FBXL20Q96IG2 436 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 HHIPQ96QV1 700 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 UBL7Q96S82 380 aaPredicted RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 SRRQ9GZT4 340 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 LIN28AQ9H9Z2 209 aaKnown RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 J3QR89 54 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 SOCS5O75159 536 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 TRAPPC2P0DI81 140 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 TRAPPC2BP0DI82 140 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 TRHRP34981 398 aaPredicted RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 ACTBP60709 375 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 ACTG1P63261 375 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 FAM74A1Q5RGS3 127 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 OR11L1Q8NGX0 322 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 APH1AQ96BI3 265 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 ABCG5Q9H222 651 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 LOXHD1Q8IVV2 1947 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 TYRP14679 529 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 OR5I1Q13606 314 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 SIRPB2Q5JXA9 342 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 GCNT2Q8N0V5 402 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 CPXM2Q8N436 756 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 M1APQ8TC57 530 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 AQP7P3A6NL99 342 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 ALDOAP04075 364 aaKnown RBP12.6□□□□□ -0.39
HIPK3-202ENST00000379016 FGFBP1Q14512 234 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 POU4F3Q15319 338 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF74Q16587 644 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 CNKSR3Q6P9H4 555 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF251Q9BRH9 671 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 MYO5CQ9NQX4 1742 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 H3BSA7 217 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 CLDN1O95832 211 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 OAS1P00973 400 aaKnown RBP12.6□□□□□ -0.39
HIPK3-202ENST00000379016 INHAP05111 366 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 IL13RA1P78552 427 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 VAMP3Q15836 100 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 OR4F6Q8NGB9 312 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 RHBDD1Q8TEB9 315 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 COQ10AQ96MF6 247 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 MFFQ9GZY8 342 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 REEP4Q9H6H4 257 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 RARRES3Q9UL19 164 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
HIPK3-202ENST00000379016 RFPL2O75678 378 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 CSN1S1P47710 185 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 MSMO1Q15800 293 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 C15orf54Q8N8G6 183 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 PRRC1Q96M27 445 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 RIOX1Q9H6W3 641 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 TAS2R8Q9NYW2 309 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
HIPK3-202ENST00000379016 A0A0B4J2A0 478 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 ADH1BP00325 375 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 POU3F2P20265 443 aaPredicted RBP12.6□□□□□ -0.39
HIPK3-202ENST00000379016 GCGRP47871 477 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 WDR31Q8NA23 367 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 KDM1BQ8NB78 822 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 FKBP10Q96AY3 582 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 RNF170Q96K19 258 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 SLC39A9Q9NUM3 307 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 ZDHHC7Q9NXF8 308 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 SHPKQ9UHJ6 478 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 SLC6A5Q9Y345 797 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 SMIM35A0A1B0GVV1 85 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 SYN3O14994 580 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 TBPP20226 339 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 RAD52P43351 418 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 DEFB134Q4QY38 66 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 SAGE1Q9NXZ1 904 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 MANBAO00462 879 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 BMP1P13497 986 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 RAB41Q5JT25 222 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 APOBEC3HQ6NTF7 200 aaKnown RBP12.6□□□□□ -0.39
HIPK3-202ENST00000379016 ASPGQ86U10 573 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 OR6C2Q9NZP2 312 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 GNG12Q9UBI6 72 aa12.6□□□□□ -0.39
HIPK3-202ENST00000379016 RAB3AP20336 220 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 UQCRC2P22695 453 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 AGFG1P52594 562 aaKnown RBP12.59□□□□□ -0.39
HIPK3-202ENST00000379016 TGFBIQ15582 683 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 OR7A5Q15622 319 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 TMEM119Q4V9L6 283 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 CTSL3PQ5NE16 218 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 PLPPR4Q7Z2D5 763 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 CGREF1Q99674 301 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF169Q14929 603 aaPredicted RBP12.59□□□□□ -0.39
HIPK3-202ENST00000379016 MEP1BQ16820 701 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 DEDD2Q8WXF8 326 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
HIPK3-202ENST00000379016 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms