RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FAM240BA0A1B0GVZ2 78 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 NPIPA5E9PKD4 350 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 YY2O15391 372 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 JRKO75564 520 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 RAB36O95755 333 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 ST6GAL1P15907 406 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 ENDOUP21128 410 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 GNALP38405 381 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 RORCP51449 518 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 LIPKQ5VXJ0 399 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 GTF2IRD2BQ6EKJ0 949 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 C11orf88Q6PI97 169 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 Q6ZPB1 254 aaPredicted RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 GTF2IRD2Q86UP8 949 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 NARS2Q96I59 477 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 SAMD8Q96LT4 415 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 NEK6Q9HC98 313 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 SRA1Q9HD15 236 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 NPIPA1Q9UND3 350 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF638Q14966 1978 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TLCD2A6NGC4 264 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TSPAN4O14817 238 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 PRAMEF10O60809 474 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TACSTD2P09758 323 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 PRR35P0CG20 571 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TRIM23P36406 574 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 RAB38P57729 211 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 LEXMQ3ZCV2 418 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 PODNL1Q6PEZ8 512 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 SPATC1Q76KD6 591 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TP53I13Q8NBR0 393 aaPredicted RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 ZFPM2Q8WW38 1151 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 NPLQ9BXD5 320 aaPredicted RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TCF7L1Q9HCS4 588 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 USP36Q9P275 1121 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 UNC13CQ8NB66 2214 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 GXYLT2A0PJZ3 443 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 WASHC1A8K0Z3 465 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 NAA10P41227 235 aaPredicted RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 FNTBP49356 437 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 AKR1D1P51857 326 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 KCNJ10P78508 379 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 NR0B2Q15466 257 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 GFOD2Q3B7J2 385 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 IDNKQ5T6J7 187 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 WASH2PQ6VEQ5 465 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TMEM184AQ6ZMB5 413 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 CHERPQ8IWX8 916 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF595Q8IYB9 648 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF440Q8IYI8 595 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 SPEM1Q8N4L4 309 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TRNT1Q96Q11 434 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF385DQ9H6B1 395 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 WASH6PQ9NQA3 447 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 OLAHQ9NV23 265 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TAS2R7Q9NYW3 318 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 CDRT1O95170 752 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 HBQ1P09105 142 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 TSFMP43897 325 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 OR1D5P58170 312 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 HSD11B2P80365 405 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 C14orf28Q4W4Y0 310 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 SYT13Q7L8C5 426 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 HDDC2Q7Z4H3 204 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 GPAT4Q86UL3 456 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 GID4Q8IVV7 300 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 DIO2Q92813 273 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 GAL3ST1Q99999 423 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 HOXD1Q9GZZ0 328 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 DDX31Q9H8H2 851 aaKnown RBP13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 LTB4R2Q9NPC1 389 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 CD93Q9NPY3 652 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 RLIMQ9NVW2 624 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 PPP4R1LQ9P1A2 415 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 DAPP1Q9UN19 280 aa13.29□□□□□ -0.28
SHROOM1-203ENST00000378679 FABP12A6NFH5 140 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 CLCA1A8K7I4 914 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 EDNRAP25101 427 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 MNDAP41218 407 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 MTNR1AP48039 350 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 NDUFA5Q16718 116 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 BTBD16Q32M84 506 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 HMBOX1Q6NT76 420 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 RPL13AP3Q6NVV1 102 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 SPRED1Q7Z699 444 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 CYB561A3Q8NBI2 242 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 TMEM239Q8WW34 195 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 ACOT11Q8WXI4 607 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 TMCO6Q96DC7 493 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 LGALS12Q96DT0 336 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 GPER1Q99527 375 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 GAREM1Q9H706 876 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 SH2B3Q9UQQ2 575 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 SPEF1Q9Y4P9 236 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 SPTY2D1-AS1A0A0U1RR47 76 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 SLC35F4A4IF30 521 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 OR6C70A6NIJ9 312 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 SAGE2PA6NJ88 616 aa13.28□□□□□ -0.28
SHROOM1-203ENST00000378679 H3BSH0 61 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms