RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 PREBQ9HCU5 417 aa7.57□□□□□ -1.2
CKAP2-203ENST00000378037 ERVK13-1Q9NX77 482 aa7.57□□□□□ -1.2
CKAP2-203ENST00000378037 SERTAD3Q9UJW9 196 aa7.57□□□□□ -1.2
CKAP2-203ENST00000378037 RNF6Q9Y252 685 aa7.57□□□□□ -1.2
CKAP2-203ENST00000378037 A0A0J9YY10 115 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 A0A1W2PPC4 97 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 FAM221BA6H8Z2 402 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF749O43361 778 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 LILRB5O75023 590 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 PTHP01270 115 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 RPLP0P05388 317 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SMIM18P0DKX4 95 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ANXA8P13928 327 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ITIH1P19827 911 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 PYCR1P32322 319 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 CRISP1P54107 249 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ILF2Q12905 390 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 GRIK2Q13002 908 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 GUSBP11Q6P575 273 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 LYPD4Q6UWN0 246 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 IL20RBQ6UXL0 311 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 RANBP3LQ86VV4 465 aaPredicted RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 KLBQ86Z14 1044 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SPARTQ8N0X7 666 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 TMEM156Q8N614 296 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 LRRC17Q8N6Y2 441 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF321PQ8N8H1 164 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 C19orf47Q8N9M1 422 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SLC39A7Q92504 469 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 MYDGFQ969H8 173 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SLC35A4Q96G79 324 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 CCDC115Q96NT0 180 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 APMAPQ9HDC9 416 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 TRNAU1APQ9NX07 287 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ADAM18Q9Y3Q7 739 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SPTY2D1-AS1A0A0U1RR47 76 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 A0A1W2PPV9 198 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 A6NHS1 94 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 MAN2B1O00754 1011 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 CDRT1O95170 752 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SRFP11831 508 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 HSD3B1P14060 373 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 GPX2P18283 190 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 HSD3B2P26439 372 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 TRIM23P36406 574 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ERVK-25P63136 954 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ROR2Q01974 943 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SRYQ05066 204 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 EIF2B5Q13144 721 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 GNA13Q14344 377 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SPCS2Q15005 226 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ZSWIM7Q19AV6 140 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 BTBD16Q32M84 506 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 PUS10Q3MIT2 529 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SPANXN2Q5MJ10 180 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ARMC4Q5T2S8 1044 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 BICRALQ6AI39 1079 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 UBE3DQ7Z6J8 389 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 KLHDC8BQ8IXV7 354 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 CYP4Z2PQ8N1L4 340 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 SVOPQ8N4V2 548 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 TSPEARQ8WU66 669 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 UBTD2Q8WUN7 234 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 THEM6Q8WUY1 208 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 C1QTNF3Q9BXJ4 246 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ANKRD60Q9BZ19 345 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 FAM192AQ9GZU8 254 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 TSPAN10Q9H1Z9 355 aaPredicted RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 MRPL15Q9P015 296 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 PISDQ9UG56 409 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 PHF11Q9UIL8 331 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 FBXL4Q9UKA2 621 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 DAPP1Q9UN19 280 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 PPIL1Q9Y3C6 166 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 USF3Q68DE3 2245 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 CENPEQ02224 2701 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 LOC100509620A0A075B734 347 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ARHGEF9O43307 516 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 EFEMP2O95967 443 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 HEXBP07686 556 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ADORA3P0DMS8 318 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 REEP5Q00765 189 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 PLCXD2Q0VAA5 305 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 DCST2Q5T1A1 773 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 TCTN3Q6NUS6 607 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 RPTNQ6XPR3 784 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 BBS1Q8NFJ9 593 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 OR56A1Q8NGH5 318 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 OR4D11Q8NGI4 311 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF675Q8TD23 568 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 OR2A14Q96R47 310 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 ITPAQ9BY32 194 aa7.56□□□□□ -1.2
CKAP2-203ENST00000378037 CDV3Q9UKY7 258 aaKnown RBP7.56□□□□□ -1.2
CKAP2-203ENST00000378037 FANCMQ8IYD8 2048 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 TP53BP1Q12888 1972 aaPredicted RBP7.55□□□□□ -1.2
CKAP2-203ENST00000378037 DAPL1A0PJW8 107 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 H3BMQ9 156 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SCDO00767 359 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SOCS6O14544 535 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms