RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TCP10LQ8TDR4 215 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 GPR151Q8TDV0 419 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 CCT7Q99832 543 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 ACBD3Q9H3P7 528 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 DSN1Q9H410 356 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 TUBB1Q9H4B7 451 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 MRTO4Q9UKD2 239 aaKnown RBP17.3■□□□□ 0.36
CBWD3-204ENST00000377349 PACSIN3Q9UKS6 424 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 WBP11Q9Y2W2 641 aaKnown RBP17.3■□□□□ 0.36
CBWD3-204ENST00000377349 DNAJC15Q9Y5T4 150 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 ANK3Q12955 4377 aaKnown RBP17.3■□□□□ 0.36
CBWD3-204ENST00000377349 FREM1Q5H8C1 2179 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 HIVEP2P31629 2446 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 SKAP2O75563 359 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-204ENST00000377349 INHBBP09529 407 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 MANFP55145 182 aaKnown RBP17.3■□□□□ 0.36
CBWD3-204ENST00000377349 CLDN15P56746 228 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 KIAA0040Q15053 153 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 RFTN2Q52LD8 501 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-204ENST00000377349 ZNF385BQ569K4 471 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 Q6ZSR9 355 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 PPP1R14CQ8TAE6 165 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 PIK3R3Q92569 461 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 SLC9A6Q92581 669 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 JADE3Q92613 823 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 REEP4Q9H6H4 257 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 MKS1Q9NXB0 559 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 TAS2R7Q9NYW3 318 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 MED11Q9P086 117 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 TRAF6Q9Y4K3 522 aa17.3■□□□□ 0.36
CBWD3-204ENST00000377349 GXYLT2A0PJZ3 443 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 DEFB108AA8MXU0 73 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 LSM1O15116 133 aaKnown RBP17.29■□□□□ 0.36
CBWD3-204ENST00000377349 NPHS1O60500 1241 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 KCNH1O95259 989 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 PRPH2P23942 346 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 CCKARP32238 428 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 CLK3P49761 638 aaKnown RBP17.29■□□□□ 0.36
CBWD3-204ENST00000377349 NKX6-1P78426 367 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-204ENST00000377349 FAM27E3Q08E93 113 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 CYP27C1Q4G0S4 372 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 VWA1Q6PCB0 445 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 MARCH3Q86UD3 253 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 GRAMD2AQ8IUY3 354 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 OR5M1Q8NGP8 315 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 AENQ8WTP8 325 aaKnown RBP17.29■□□□□ 0.36
CBWD3-204ENST00000377349 STARD4Q96DR4 205 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 ARSGQ96EG1 525 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 OTUB1Q96FW1 271 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-204ENST00000377349 C1orf50Q9BV19 199 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 TBL1XR1Q9BZK7 514 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 LGALS13Q9UHV8 139 aa17.29■□□□□ 0.36
CBWD3-204ENST00000377349 SONP18583 2426 aaKnown RBP17.28■□□□□ 0.36
CBWD3-204ENST00000377349 MSTNO14793 375 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 SEC14L5O43304 696 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 CTIFO43310 598 aaKnown RBP17.28■□□□□ 0.36
CBWD3-204ENST00000377349 PEX11AO75192 247 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 SLU7O95391 586 aaKnown RBP17.28■□□□□ 0.36
CBWD3-204ENST00000377349 PRPS2P11908 318 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 CREB1P16220 341 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 HK1P19367 917 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 HPCAL1P37235 193 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 PCYT1AP49585 367 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 PSMD4P55036 377 aaKnown RBP17.28■□□□□ 0.36
CBWD3-204ENST00000377349 DIO3P55073 304 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 KRT71Q3SY84 523 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 SHEQ5VZ18 495 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 PPP4R4Q6NUP7 873 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 EMBQ6PCB8 327 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 CHMP1BQ7LBR1 199 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 P4HA3Q7Z4N8 544 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 EXOC3L1Q86VI1 746 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 FADS6Q8N9I5 356 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 ZBED6CLQ96FA7 236 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-204ENST00000377349 METTL2AQ96IZ6 378 aaKnown RBP17.28■□□□□ 0.36
CBWD3-204ENST00000377349 CENPHQ9H3R5 247 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 C3orf14Q9HBI5 128 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 SDHAF3Q9NRP4 125 aa17.28■□□□□ 0.36
CBWD3-204ENST00000377349 C6orf203Q9P0P8 240 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-204ENST00000377349 WDR91A4D1P6 747 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 CPOXP36551 454 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 DSCR4P56555 118 aaPredicted RBP17.27■□□□□ 0.35
CBWD3-204ENST00000377349 EEF1A1P68104 462 aaKnown RBP17.27■□□□□ 0.35
CBWD3-204ENST00000377349 BCL2A1Q16548 175 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 EEF1A1P5Q5VTE0 462 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 ZNF474Q6S9Z5 364 aaPredicted RBP17.27■□□□□ 0.35
CBWD3-204ENST00000377349 NUP43Q8NFH3 380 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 PKNOX2Q96KN3 472 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 MARK4Q96L34 752 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 WFIKKN1Q96NZ8 548 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 LMF2Q9BU23 707 aaKnown RBP17.27■□□□□ 0.35
CBWD3-204ENST00000377349 RTN4RQ9BZR6 473 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 TMED5Q9Y3A6 229 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 SNX8Q9Y5X2 465 aa17.27■□□□□ 0.35
CBWD3-204ENST00000377349 TMEM114B3SHH9 223 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 H0YC42 278 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 H3BML4 177 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 UTS2O95399 124 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 PSMG1O95456 288 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 IL33O95760 270 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms