RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 TPT1P8Q9HAU6 139 aa13.72□□□□□ -0.21
UBA1-202ENST00000377269 WASH6PQ9NQA3 447 aa13.72□□□□□ -0.21
UBA1-202ENST00000377269 KCMF1Q9P0J7 381 aa13.72□□□□□ -0.21
UBA1-202ENST00000377269 PCDHB11Q9Y5F2 797 aa13.72□□□□□ -0.21
UBA1-202ENST00000377269 AKAP8O43823 692 aaKnown RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 PRAMEF4O60810 478 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 PDYNP01213 254 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 ANXA3P12429 323 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 POU2F1P14859 743 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 ACPPP15309 386 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 ILF3Q12906 894 aaKnown RBP eCLIP13.71□□□□□ -0.21
UBA1-202ENST00000377269 LGALSLQ3ZCW2 172 aaPredicted RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 PLA1AQ53H76 456 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 PRAMEF9Q5VWM5 478 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 LURAP1LQ8IV03 231 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 OR52P1PQ8NH57 321 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 GTPBP3Q969Y2 492 aaKnown RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 SCMH1Q96GD3 660 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 RADILQ96JH8 1075 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 OR4K3Q96R72 315 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 UQCC2Q9BRT2 126 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 LRRC61Q9BV99 259 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 THSD1Q9NS62 852 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 RDH8Q9NYR8 311 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 ZNF624Q9P2J8 865 aaPredicted RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 COMMD3Q9UBI1 195 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 APOBEC3BQ9UH17 382 aaKnown RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 NDOR1Q9UHB4 597 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 ZNF175Q9Y473 711 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 KCNMB2Q9Y691 235 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 TDRD6O60522 2096 aaKnown RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 CABIN1Q9Y6J0 2220 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 A6NCN8 305 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 NPIPB8E9PQR5 432 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 GTPBP1O00178 669 aaKnown RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 SDC3O75056 442 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 PRPS1L1P21108 318 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 STOMP27105 288 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 HNMTP50135 292 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 ZNF33BQ06732 778 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 IL18Q14116 193 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 PLK5Q496M5 336 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 IFI44LQ53G44 452 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 PMS2CLQ68D20 193 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 RTL4Q6ZR62 310 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 DCUN1D3Q8IWE4 304 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 ADGRF3Q8IZF5 1079 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 GPBAR1Q8TDU6 330 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 PCNPQ8WW12 178 aaKnown RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 UFD1Q92890 307 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 CMTM7Q96FZ5 175 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 IL4I1Q96RQ9 567 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 MENTQ9BUN1 341 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 SLC32A1Q9H598 525 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 SCPEP1Q9HB40 452 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 FSCN3Q9NQT6 498 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 ACER3Q9NUN7 267 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 TAAR2Q9P1P5 351 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 MALT1Q9UDY8 824 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 RPL36Q9Y3U8 105 aaKnown RBP13.71□□□□□ -0.21
UBA1-202ENST00000377269 ASB4Q9Y574 426 aa13.71□□□□□ -0.21
UBA1-202ENST00000377269 ARHGEF17Q96PE2 2063 aaPredicted RBP13.71□□□□□ -0.22
UBA1-202ENST00000377269 THADAQ6YHU6 1953 aa13.71□□□□□ -0.22
UBA1-202ENST00000377269 A0A1B0GVT2 93 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 ARRDC5A6NEK1 342 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 PRAMEF25A6NGN4 478 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 HPGDSO60760 199 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 CTSEP14091 401 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 EPB42P16452 691 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 TNFRSF1BP20333 461 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 AQP1P29972 269 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 AVPR2P30518 371 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 INPP1P49441 399 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 NXPH1P58417 271 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 TAP2Q03519 686 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 PUDPQ08623 228 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 TEAD4Q15561 434 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 SNAPC1Q16533 368 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 CDKL4Q5MAI5 379 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 LYSMD4Q5XG99 296 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 TAF8Q7Z7C8 310 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 FBXO15Q8NCQ5 510 aaPredicted RBP13.7□□□□□ -0.22
UBA1-202ENST00000377269 RIT1Q92963 219 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 RAD51AP1Q96B01 352 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 DACT3Q96B18 629 aaPredicted RBP13.7□□□□□ -0.22
UBA1-202ENST00000377269 SGTBQ96EQ0 304 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 IFT46Q9NQC8 304 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 FAM120CQ9NX05 1096 aaKnown RBP13.7□□□□□ -0.22
UBA1-202ENST00000377269 GLS2Q9UI32 602 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 SH2B3Q9UQQ2 575 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 DSPPQ9NZW4 1301 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 OR5K4A6NMS3 321 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 PRAMEF10O60809 474 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 CLDN9O95484 217 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 WDPCPO95876 746 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 ACSM4P0C7M7 580 aa13.7□□□□□ -0.22
UBA1-202ENST00000377269 AFF3P51826 1226 aaKnown RBP13.7□□□□□ -0.22
UBA1-202ENST00000377269 ZMYND11Q15326 602 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms