RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CRTC2Q53ET0 693 aaPredicted RBP11.53□□□□□ -0.56
VRK3-202ENST00000377011 TCTE1Q5JU00 501 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 PLEKHG7Q6ZR37 379 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 USP43Q70EL4 1123 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 AHSA2Q719I0 299 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 C17orf64Q86WR6 236 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 RNF175Q8N4F7 328 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 OR4K1Q8NGD4 311 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 OR9A4Q8NGU2 314 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 CDC26Q8NHZ8 85 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 TM4SF19Q96DZ7 209 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 ZHX1-C8orf76Q96EF9 292 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 ARHGAP9Q9BRR9 750 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 DMRT3Q9NQL9 472 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 INIPQ9NRY2 104 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 CCDC59Q9P031 241 aaKnown RBP11.53□□□□□ -0.56
VRK3-202ENST00000377011 ANKMY1Q9P2S6 941 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 SRPK3Q9UPE1 567 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 FLNCQ14315 2725 aa11.53□□□□□ -0.56
VRK3-202ENST00000377011 SH3D21A4FU49 640 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 HAX1O00165 279 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 TBX6O95947 436 aaPredicted RBP11.52□□□□□ -0.56
VRK3-202ENST00000377011 HBQ1P09105 142 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 NUDT7P0C024 238 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 C1GALT1C1LP0DN25 315 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 BMP4P12644 408 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 NR4A1P22736 598 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 EPHA2P29317 976 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 VBP1P61758 197 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 RPS13P62277 151 aaKnown RBP11.52□□□□□ -0.56
VRK3-202ENST00000377011 EEF1A2Q05639 463 aaKnown RBP11.52□□□□□ -0.56
VRK3-202ENST00000377011 SCARB2Q14108 478 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 SMN1Q16637 294 aaKnown RBP11.52□□□□□ -0.56
VRK3-202ENST00000377011 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.52□□□□□ -0.56
VRK3-202ENST00000377011 OVCH1Q7RTY7 1134 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 TSEN54Q7Z6J9 526 aaKnown RBP11.52□□□□□ -0.56
VRK3-202ENST00000377011 GALNT10Q86SR1 603 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 ARMC8Q8IUR7 673 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 KBTBD8Q8NFY9 601 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 ZCCHC10Q8TBK6 192 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 SPPL2AQ8TCT8 520 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 SLC5A11Q8WWX8 675 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 PPCDCQ96CD2 204 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 COL21A1Q96P44 957 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 MAPKAP1Q9BPZ7 522 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 SLC35A5Q9BS91 424 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 NXF2Q9GZY0 626 aaKnown RBP11.52□□□□□ -0.56
VRK3-202ENST00000377011 SH3BP4Q9P0V3 963 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 EXO1Q9UQ84 846 aaKnown RBP11.52□□□□□ -0.56
VRK3-202ENST00000377011 POLHQ9Y253 713 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 ANGPT4Q9Y264 503 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 PMF1-BGLAPU3KQ54 211 aa11.52□□□□□ -0.56
VRK3-202ENST00000377011 ZNF860A6NHJ4 632 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 VSTM2BA6NLU5 285 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 TBX19O60806 448 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 C1QCP02747 245 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 ARAFP10398 606 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 GABRB1P18505 474 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 LIMS1P48059 325 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 CLK1P49759 484 aaKnown RBP11.52□□□□□ -0.57
VRK3-202ENST00000377011 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
VRK3-202ENST00000377011 NCS1P62166 190 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.52□□□□□ -0.57
VRK3-202ENST00000377011 HYAL2Q12891 473 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 KRR1Q13601 381 aaKnown RBP11.52□□□□□ -0.57
VRK3-202ENST00000377011 DGCR6Q14129 220 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 FAM71E1Q6IPT2 247 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 SLC46A3Q7Z3Q1 461 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 COMMD6Q7Z4G1 85 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 MRGPREQ86SM8 312 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 TMPRSS11BQ86T26 416 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 METTL4Q8N3J2 472 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 SCAIQ8N9R8 606 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 OR5T3Q8NGG3 340 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 OR2Y1Q8NGV0 311 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 APOBEC4Q8WW27 367 aaKnown RBP11.52□□□□□ -0.57
VRK3-202ENST00000377011 COL26A1Q96A83 441 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 WBP1Q96G27 269 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 FEVQ99581 238 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 PIP5K1AQ99755 562 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 DSN1Q9H410 356 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 KLHL31Q9H511 634 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 ARMC7Q9H6L4 198 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 ZNF556Q9HAH1 456 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 RASSF1Q9NS23 344 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 TAS2R9Q9NYW1 312 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 CNOT2Q9NZN8 540 aaKnown RBP11.52□□□□□ -0.57
VRK3-202ENST00000377011 TP53TG5Q9Y2B4 290 aa11.52□□□□□ -0.57
VRK3-202ENST00000377011 GPC6Q9Y625 555 aaPredicted RBP11.52□□□□□ -0.57
VRK3-202ENST00000377011 NUP210LQ5VU65 1888 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 TMEM247A6NEH6 219 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 METTL15A6NJ78 407 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 A6NL46 340 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 C9J4A7 227 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 SGK494L7N484 410 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 OR1F1O43749 312 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 AIREO43918 545 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 LCKP06239 509 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 CRATP43155 626 aa11.51□□□□□ -0.57
VRK3-202ENST00000377011 XCR1P46094 333 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms