RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 KLHL22Q53GT1 634 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 RNLSQ5VYX0 342 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 ZCCHC12Q6PEW1 402 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 FIGNL1Q6PIW4 674 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 PAQR6Q6TCH4 344 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 TOR1AIP2Q8NFQ8 470 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 CAPN10Q9HC96 672 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 EXOSC4Q9NPD3 245 aaKnown RBP18.82■□□□□ 0.6
VSX1-202ENST00000376709 KRCC1Q9NPI7 259 aaPredicted RBP18.82■□□□□ 0.6
VSX1-202ENST00000376709 FBXO34Q9NWN3 711 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 NLGN3Q9NZ94 848 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 A3GALT2U3KPV4 340 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 NPIPA5A0A0B4J1W7 369 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 NPIPA7E9PJI5 369 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 PEX12O00623 359 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 PIP5K1CO60331 668 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 CTSBP07858 339 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 NPIPA8P0DM63 369 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 NID1P14543 1247 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 MYL12AP19105 171 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 S100A5P33763 92 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 SOX6P35712 828 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 STAT5AP42229 794 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 ZNF136P52737 540 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 MAZP56270 477 aaKnown RBP18.81■□□□□ 0.6
VSX1-202ENST00000376709 UBXN2BQ14CS0 331 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 MRPL2Q5T653 305 aaKnown RBP18.81■□□□□ 0.6
VSX1-202ENST00000376709 SLC30A6Q6NXT4 461 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 CYP4Z2PQ8N1L4 340 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 AVL9Q8NBF6 648 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 FGF11Q92914 225 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 ANKRD9Q96BM1 317 aaPredicted RBP18.81■□□□□ 0.6
VSX1-202ENST00000376709 CDADC1Q9BWV3 514 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 TESQ9UGI8 421 aaKnown RBP18.81■□□□□ 0.6
VSX1-202ENST00000376709 CFL2Q9Y281 166 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 BOLA2-SMG1P6H3BVE0 249 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 HBQ1P09105 142 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 GKN3PP0CG01 181 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 PSMA1P25786 263 aaKnown RBP18.81■□□□□ 0.6
VSX1-202ENST00000376709 GABRA3P34903 492 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 RNF144AP50876 292 aaPredicted RBP18.81■□□□□ 0.6
VSX1-202ENST00000376709 MGAT2Q10469 447 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 ZNF155Q12901 538 aaPredicted RBP18.81■□□□□ 0.6
VSX1-202ENST00000376709 MRGPREQ86SM8 312 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 VWA5B2Q8N398 1253 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 MROQ9BYG7 248 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 RBCK1Q9BYM8 510 aa18.81■□□□□ 0.6
VSX1-202ENST00000376709 SLC9B1P1A6NJY1 282 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 GPX5O75715 221 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 APOL3O95236 402 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 CH25HO95992 272 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 PRG2P13727 222 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 RPS4Y1P22090 263 aaKnown RBP18.8■□□□□ 0.6
VSX1-202ENST00000376709 BCAP31P51572 246 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 POU6F2P78424 691 aaPredicted RBP18.8■□□□□ 0.6
VSX1-202ENST00000376709 OXA1LQ15070 435 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 EXOSC6Q5RKV6 272 aaKnown RBP18.8■□□□□ 0.6
VSX1-202ENST00000376709 ANKK1Q8NFD2 765 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 OR9Q1Q8NGQ5 310 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 RNF217Q8TC41 542 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 RNFT2Q96EX2 444 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 FOXQ1Q9C009 403 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 CHCHD3Q9NX63 227 aaKnown RBP18.8■□□□□ 0.6
VSX1-202ENST00000376709 IL20Q9NYY1 176 aa18.8■□□□□ 0.6
VSX1-202ENST00000376709 IRGMA1A4Y4 181 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 TRAPPC13A5PLN9 417 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 CHST10O43529 356 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 ZNF217O75362 1048 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 AK1P00568 194 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 SLC35E2P0CK97 266 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 ETV5P41161 510 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 MTNR1AP48039 350 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 RFX3P48380 749 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 PPM1FP49593 454 aaPredicted RBP18.79■□□□□ 0.6
VSX1-202ENST00000376709 ETV1P50549 477 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 PPP5CP53041 499 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 RAB40BQ12829 278 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 MLLT11Q13015 90 aaPredicted RBP18.79■□□□□ 0.6
VSX1-202ENST00000376709 NIPAL1Q6NVV3 410 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 MCATQ8IVS2 390 aaKnown RBP18.79■□□□□ 0.6
VSX1-202ENST00000376709 CTHRC1Q96CG8 243 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 NXF2Q9GZY0 626 aaKnown RBP18.79■□□□□ 0.6
VSX1-202ENST00000376709 CARD8Q9Y2G2 431 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 A0A0A6YYC8 382 aaPredicted RBP18.79■□□□□ 0.6
VSX1-202ENST00000376709 CDHR4A6H8M9 788 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 I3L1I5 382 aaPredicted RBP18.79■□□□□ 0.6
VSX1-202ENST00000376709 SLC13A2Q13183 592 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 FZD5Q13467 585 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 ZNF620Q6ZNG0 422 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 OR52R1Q8NGF1 315 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 FAM174AQ8TBP5 190 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 CNPPD1Q9BV87 410 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 NDUFB11Q9NX14 153 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 IL20RAQ9UHF4 553 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 KCNE5Q9UJ90 142 aa18.79■□□□□ 0.6
VSX1-202ENST00000376709 GXYLT2A0PJZ3 443 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 KRBA1A5PL33 1030 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 ELOCQ15369 112 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 MINDY4Q4G0A6 757 aa18.78■□□□□ 0.6
VSX1-202ENST00000376709 C3orf38Q5JPI3 329 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms