RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PIK3R3Q92569 461 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 CIDECQ96AQ7 238 aaPredicted RBP18.98■□□□□ 0.63
VSX1-201ENST00000376707 PPCDCQ96CD2 204 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 STARD4Q96DR4 205 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 PINK1Q9BXM7 581 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 SLC17A7Q9P2U7 560 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 EIF3LQ9Y262 564 aaKnown RBP18.98■□□□□ 0.63
VSX1-201ENST00000376707 TMED5Q9Y3A6 229 aa18.98■□□□□ 0.63
VSX1-201ENST00000376707 GXYLT2A0PJZ3 443 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 H0YC42 278 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 LSM1O15116 133 aaKnown RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 AKAP10O43572 662 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 GMFGO60234 142 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 ANGPTL1O95841 491 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 CHRNGP07510 517 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 SDC1P18827 310 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 SUCLG1P53597 346 aaKnown RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 PRKAG1P54619 331 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 TPD52P55327 224 aaPredicted RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 CLDN15P56746 228 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 SIRPAP78324 504 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 FOXD4Q12950 439 aaPredicted RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 GLYR1Q49A26 553 aaPredicted RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 RFTN2Q52LD8 501 aaPredicted RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 ARL13AQ5H913 290 aaPredicted RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 VWA1Q6PCB0 445 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 SZRD1Q7Z422 152 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 CEP70Q8NHQ1 597 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 TCP10LQ8TDR4 215 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 SMPDL3BQ92485 455 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 ZBED6CLQ96FA7 236 aaPredicted RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 PGM2Q96G03 612 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 TSSK3Q96PN8 268 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 TMEM109Q9BVC6 243 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 REEP4Q9H6H4 257 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 EML4Q9HC35 981 aaKnown RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 SH3BP4Q9P0V3 963 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 TRAF6Q9Y4K3 522 aa18.97■□□□□ 0.63
VSX1-201ENST00000376707 HRNRQ86YZ3 2850 aaPredicted RBP18.97■□□□□ 0.63
VSX1-201ENST00000376707 IGKV1D-16P01601 117 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 LINC00032P0C843 101 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 FRKP42685 505 aaPredicted RBP18.96■□□□□ 0.63
VSX1-201ENST00000376707 MANFP55145 182 aaKnown RBP18.96■□□□□ 0.63
VSX1-201ENST00000376707 CLDN20P56880 219 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 RPS3AP61247 264 aaKnown RBP18.96■□□□□ 0.63
VSX1-201ENST00000376707 RPL38P63173 70 aaKnown RBP18.96■□□□□ 0.63
VSX1-201ENST00000376707 PRR5P85299 388 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 FAM27E3Q08E93 113 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 PDE7AQ13946 482 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 GRAMD1BQ3KR37 738 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 BTLAQ7Z6A9 289 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 EXOC3L1Q86VI1 746 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 CDRT4Q8N9R6 151 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 NUP43Q8NFH3 380 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 CLHC1Q8NHS4 586 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 SLC9A6Q92581 669 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 HOXB13Q92826 284 aaPredicted RBP18.96■□□□□ 0.63
VSX1-201ENST00000376707 MECRQ9BV79 373 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 ZNF175Q9Y473 711 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 TESMINQ9Y4I5 508 aa18.96■□□□□ 0.63
VSX1-201ENST00000376707 IGLV3-32A0A0A0MS00 114 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 TMEM233B4DJY2 109 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 SPAG7O75391 227 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 NKX2-2O95096 273 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 SERPINB5P36952 375 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 CD79BP40259 229 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 KIR2DL2P43627 348 aaPredicted RBP18.95■□□□□ 0.62
VSX1-201ENST00000376707 ADAM8P78325 824 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 PON3Q15166 354 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 SGCBQ16585 318 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 ZNF385BQ569K4 471 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 APOOLQ6UXV4 268 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 MREGQ8N565 214 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 FNDC9Q8TBE3 224 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 TWIST2Q8WVJ9 160 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 ZNF845Q96IR2 970 aaPredicted RBP18.95■□□□□ 0.62
VSX1-201ENST00000376707 MS4A4EQ96PG1 132 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 SLC39A3Q9BRY0 314 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 OPN3Q9H1Y3 402 aaPredicted RBP18.95■□□□□ 0.62
VSX1-201ENST00000376707 RNF122Q9H9V4 155 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 HHATLQ9HCP6 504 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 NTMQ9P121 344 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 STOML1Q9UBI4 398 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 BAIAP2L1Q9UHR4 511 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 AP4B1Q9Y6B7 739 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 MPDZO75970 2070 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 ZFHX3Q15911 3703 aa18.95■□□□□ 0.62
VSX1-201ENST00000376707 EMC8O43402 210 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 TYROBPO43914 113 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 SLU7O95391 586 aaKnown RBP18.94■□□□□ 0.62
VSX1-201ENST00000376707 ASMTP46597 345 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 KCNJ5P48544 419 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 PCYT1AP49585 367 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 FGFBP1Q14512 234 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 GALNTL6Q49A17 601 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 GALNT10Q86SR1 603 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 DDIASQ8IXT1 998 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 OR6Y1Q8NGX8 325 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 FBXO30Q8TB52 745 aa18.94■□□□□ 0.62
VSX1-201ENST00000376707 MTERF3Q96E29 417 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms