RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ZNF766Q5HY98 468 aa8.43□□□□□ -1.06
UBR4-201ENST00000375218 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.43□□□□□ -1.06
UBR4-201ENST00000375218 LINGO2Q7L985 606 aa8.43□□□□□ -1.06
UBR4-201ENST00000375218 HJURPQ8NCD3 748 aaPredicted RBP8.43□□□□□ -1.06
UBR4-201ENST00000375218 SNIP1Q8TAD8 396 aaKnown RBP8.43□□□□□ -1.06
UBR4-201ENST00000375218 PLEKHA1Q9HB21 404 aa8.43□□□□□ -1.06
UBR4-201ENST00000375218 PPP4R1LQ9P1A2 415 aa8.43□□□□□ -1.06
UBR4-201ENST00000375218 CNOT8Q9UFF9 292 aaKnown RBP8.43□□□□□ -1.06
UBR4-201ENST00000375218 MOKQ9UQ07 419 aa8.43□□□□□ -1.06
UBR4-201ENST00000375218 SNX24Q9Y343 169 aa8.43□□□□□ -1.06
UBR4-201ENST00000375218 ALG6Q9Y672 507 aa8.43□□□□□ -1.06
UBR4-201ENST00000375218 TTC3P53804 2025 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ELOA3CA0A087WX78 387 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 IGKV6-21A0A0C4DH24 114 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 A0A1W2PPM1 405 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ELOA3DA6NLF2 546 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 AZIN1O14977 448 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 IDH2P48735 452 aaKnown RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 CDK9P50750 372 aaKnown RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 BLKP51451 505 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 AESQ08117 197 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 TARDBPQ13148 414 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBR4-201ENST00000375218 SKP2Q13309 424 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 PHF19Q5T6S3 580 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 UBE2UQ5VVX9 321 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 FAM46CQ5VWP2 391 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ASPHD2Q6ICH7 369 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ABI3BPQ7Z7G0 1075 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 STX19Q8N4C7 294 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 PDPRQ8NCN5 879 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 OR52N2Q8NGI0 321 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 OR2L2Q8NH16 312 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 MS4A3Q96HJ5 214 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ERGIC2Q96RQ1 377 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 MCCC1Q96RQ3 725 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 TRAF4Q9BUZ4 470 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 ST6GALNAC5Q9BVH7 336 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 RBM24Q9BX46 236 aaKnown RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 SLC39A8Q9C0K1 460 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 CSTL1Q9H114 145 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 CPNE5Q9HCH3 593 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 OLFML3Q9NRN5 406 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 TAS2R14Q9NYV8 317 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 OBSL1O75147 1896 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 RFXANKO14593 260 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 GOSR2O14653 212 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 CHP2O43745 196 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 LCMT2O60294 686 aaKnown RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 WDPCPO95876 746 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 RPN2P04844 631 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 CETPP11597 493 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ACP5P13686 325 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 SDHBP21912 280 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 TMEM33P57088 247 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 CDC42EP1Q00587 391 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 OR2B11Q5JQS5 317 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 DMRTA1Q5VZB9 504 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 REEP3Q6NUK4 255 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 SLC27A1Q6PCB7 646 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 RRM2BQ7LG56 351 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 SLC16A13Q7RTY0 426 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 PIWIL4Q7Z3Z4 852 aaKnown RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 RIBC1Q8N443 379 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 ST6GALNAC3Q8NDV1 305 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 NAT14Q8WUY8 206 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ARRDC3Q96B67 414 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 MMABQ96EY8 250 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 C16orf70Q9BSU1 422 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 MRI1Q9BV20 369 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 TSSK1BQ9BXA7 367 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 SMOC2Q9H3U7 446 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 MTHFD2LQ9H903 347 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 ACSS2Q9NR19 701 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 OSER1Q9NX31 292 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 NCKIPSDQ9NZQ3 722 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 CLEC1BQ9P126 229 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 FARSAQ9Y285 508 aaKnown RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 CAPN6Q9Y6Q1 641 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 FAM90A7PA6NKC0 464 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 FAM90A22PA8MWA6 464 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 FAM90A12PA8MX19 464 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 FAM90A23PA8MXZ1 464 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 UBDO15205 165 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 INPP4BO15327 924 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 VIPP01282 170 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 SMIM6P0DI80 62 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ZP3P21754 424 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 CCR7P32248 378 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 FOXN2P32314 431 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 MYBPC1Q00872 1141 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 HMGCS1Q01581 520 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 C16orf72Q14CZ0 275 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 SLC25A53Q5H9E4 307 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 WASHC2DQ5SRD0 308 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 MYPOPQ86VE0 399 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 FAM98AQ8NCA5 519 aaKnown RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 KCNJ9Q92806 393 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 ZBTB45Q96K62 511 aaPredicted RBP8.42□□□□□ -1.06
UBR4-201ENST00000375218 SERPINB12Q96P63 405 aa8.42□□□□□ -1.06
UBR4-201ENST00000375218 BCO1Q9HAY6 547 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms