RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 BORAQ6PGQ7 559 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 SPARTQ8N0X7 666 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 STK35Q8TDR2 534 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 LMX1AQ8TE12 382 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 TFAP2CQ92754 450 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 FUBP1Q96AE4 644 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF689Q96CS4 500 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 HRASLS2Q9NWW9 162 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 GPRC5BQ9NZH0 403 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 CYP8B1Q9UNU6 501 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 CEPT1Q9Y6K0 416 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 LOXHD1Q8IVV2 1947 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 MCM3APO60318 1980 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 TRAV18A0A075B6X5 111 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 CAPNS1P04632 268 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 RPS2P15880 293 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 PRSS3P35030 304 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 RNF144AP50876 292 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 VSX2P58304 361 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 TAS2R38P59533 333 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ERVPABLB-1P60509 514 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 GK3PQ14409 553 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 HNRNPA1L2Q32P51 320 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 PCGF3Q3KNV8 242 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 TMEM164Q5U3C3 297 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC7A5P1Q8MH63 180 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ARRDC2Q8TBH0 407 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 FGF13Q92913 245 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 CDC6Q99741 560 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 FN3KQ9H479 309 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 RDH14Q9HBH5 336 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 APMAPQ9HDC9 416 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 IL26Q9NPH9 171 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 A0A1B0GV50 99 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 KIAA0355O15063 1070 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 AQP2P41181 271 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ALDH3B1P43353 468 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 DEFB134Q4QY38 66 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 NADSYN1Q6IA69 706 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 KCTD20Q7Z5Y7 419 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 OR5AK2Q8NH90 309 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ZFP90Q8TF47 636 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 KHSRPQ92945 711 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■■■□□ 14.8
NPLOC4-202ENST00000374747 TMEM125Q96AQ2 219 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC30A3Q99726 388 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 SYT3Q9BQG1 590 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 TREX1Q9NSU2 369 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 CD207Q9UJ71 328 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 B3GNT3Q9Y2A9 372 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 LAMP1P11279 417 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 EN2P19622 333 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 PGCP20142 388 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 HOXC13P31276 330 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ELOCQ15369 112 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 AKR1C8PQ5T2L2 129 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 PHF19Q5T6S3 580 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 FAM205BPQ63HN1 556 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 PLAG1Q6DJT9 500 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC18B1Q6NT16 456 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 NRMQ8IXM6 262 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ESX1Q8N693 406 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 IQCF1Q8N6M8 205 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF611Q8N823 705 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 BEST4Q8NFU0 473 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 MZB1Q8WU39 189 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 MAL2Q969L2 176 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 PELOQ9BRX2 385 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 DHRS4Q9BTZ2 278 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 OR51J1Q9H342 316 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 IGSF5Q9NSI5 407 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF175Q9Y473 711 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 TRAPPC13A5PLN9 417 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 SCO2O43819 266 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 SORBS2O94875 1100 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 F11P03951 625 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 UGT2B7P16662 529 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 HOXB9P17482 250 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 PBX2P40425 430 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 HTR6P50406 440 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 NKX3-2P78367 333 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ARL6IP1Q15041 203 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 OR4K13Q8NH42 304 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 PTCHD1Q96NR3 888 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 CWH43Q9H720 699 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF442Q9H7R0 627 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 GRXCR2A6NFK2 248 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 NPIPB15A6NHN6 443 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 HIDE1A8MVS5 230 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ARSAP15289 507 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 ITGB7P26010 798 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 PLCXD2Q0VAA5 305 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 LRP8Q14114 963 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 RGNQ15493 299 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 LHX8Q68G74 356 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 OR4C11Q6IEV9 310 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 AGPAT4Q9NRZ5 378 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 LRFN1Q9P244 771 aa11.6□□□□□ -0.55
NPLOC4-202ENST00000374747 DNMT3BQ9UBC3 853 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms