RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ZFPM2Q8WW38 1151 aa16.57■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MED28Q9H204 178 aa16.57■□□□□ 0.24
TRAF3IP1-201ENST00000373327 TP63Q9H3D4 680 aaPredicted RBP16.57■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PPIL1Q9Y3C6 166 aa16.57■□□□□ 0.24
TRAF3IP1-201ENST00000373327 FAM172BPA6NC97 362 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 TOXO94900 526 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 REEP5Q00765 189 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ALG10BQ5I7T1 473 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 TMEM53Q6P2H8 277 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MINDY2Q8NBR6 621 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 OR8H1Q8NGG4 311 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 OR2A1Q8NGT9 310 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 GPATCH2Q9NW75 528 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 LYARQ9NX58 379 aaKnown RBP16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MKL2Q9ULH7 1088 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 LAMA3Q16787 3333 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MYLKQ15746 1914 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MCIDASD6RGH6 385 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 GRK5P34947 590 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 HHEXQ03014 270 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 HSPA12BQ96MM6 686 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 THSD1Q9NS62 852 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 SEMA4GQ9NTN9 838 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 THAP10Q9P2Z0 257 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 CCDC85CA6NKD9 419 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 HOXC11O43248 304 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 AQP9O43315 295 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 CPMP14384 443 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PSMB10P40306 273 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ETV5P41161 510 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ETV1P50549 477 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 RPS15AP62244 130 aaKnown RBP16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 KCNJ8Q15842 424 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ZNF793Q6ZN11 406 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PROKR2Q8NFJ6 384 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ZFYVE21Q9BQ24 234 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 HSPB11Q9Y547 144 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 H0YGG7 62 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PRODHO43272 600 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 JUNDP17535 347 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PCMT1P22061 227 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 RCVRNP35243 200 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ARF3P61204 181 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MRPL2Q5T653 305 aaKnown RBP16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ANKRD54Q6NXT1 300 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 GPR32P1Q8NGA4 272 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 APH1BQ8WW43 257 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MS4A6EQ96DS6 147 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 OR52D1Q9H346 318 aa16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 EXOSC1Q9Y3B2 195 aaKnown RBP16.56■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 SLC44A3Q8N4M1 653 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 THEM6Q8WUY1 208 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 TSEN15Q8WW01 171 aaKnown RBP16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 YIPF6Q96EC8 236 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ZNF582Q96NG8 517 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ZNF559Q9BR84 538 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 TMEM246Q9BRR3 403 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MTHFD2LQ9H903 347 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 Q9N2J8 555 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 GDE1Q9NZC3 331 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 C2orf74A8MZ97 194 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PEX12O00623 359 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 DHFRP00374 187 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 CISD3P0C7P0 127 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 SOX18P35713 384 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 TRIM23P36406 574 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MLLT3P42568 568 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 GPR18Q14330 331 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PON3Q15166 354 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 TMEM64Q6YI46 380 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 SLC37A3Q8NCC5 494 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 DPYSL5Q9BPU6 564 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MROQ9BYG7 248 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 GSDMCQ9BYG8 508 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 DICER1Q9UPY3 1922 aaKnown RBP16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PLGP00747 810 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 THEGLP0DJG4 465 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 GZMMP51124 257 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 NDUFAF6Q330K2 333 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 TSTD1Q8NFU3 115 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ELP4Q96EB1 424 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 NEDD4LQ96PU5 975 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 PLA2G12AQ9BZM1 189 aa16.55■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ILKQ13418 452 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 C1orf189Q5VU69 101 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 SERPINA12Q8IW75 414 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 LINC00471Q8N535 108 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 BBS1Q8NFJ9 593 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 OR52I1Q8NGK6 324 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 EFHD2Q96C19 240 aaPredicted RBP16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MRPL48Q96GC5 212 aaKnown RBP16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 MYADMQ96S97 322 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ALG8Q9BVK2 526 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ACSS1Q9NUB1 689 aaPredicted RBP16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 APOBEC3BQ9UH17 382 aaKnown RBP16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 ATXN7L1Q9ULK2 861 aaPredicted RBP16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 LOC105369274A0A096LPK9 316 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 LOC102723532A0A0G2JNH3 316 aa16.54■□□□□ 0.24
TRAF3IP1-201ENST00000373327 UBXN7O94888 489 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms