RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ATP5J2P56134 94 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 PRR5P85299 388 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 C2orf80Q0P641 193 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 APOOLQ6UXV4 268 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 DCAKDQ8WVC6 231 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 ELP4Q96EB1 424 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 LMF2Q9BU23 707 aaKnown RBP11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 TSPYL1Q9H0U9 437 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 CDC42EP4Q9H3Q1 356 aaKnown RBP11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 GPR52Q9Y2T5 361 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 WBP11Q9Y2W2 641 aaKnown RBP11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 HEATR5AQ86XA9 2040 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
TRAPPC3-201ENST00000373159 CCDC151A5D8V7 595 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 TTC36A6NLP5 189 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 EIF1AYO14602 144 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 ADAMDEC1O15204 470 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 DLX3O60479 287 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 UTS2O95399 124 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 ANGPTL1O95841 491 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 PLGP00747 810 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 ENO1P06733 434 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 SNRPAP09012 282 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 HTR6P50406 440 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 PKNOX1P55347 436 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 CTBP2P56545 445 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 BTKQ06187 659 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 ZNF763Q0D2J5 394 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 TNK1Q13470 666 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 ZNHIT3Q15649 155 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 TEX35Q5T0J7 233 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 LGSNQ5TDP6 509 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 FAM71E1Q6IPT2 247 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 ADAM5Q6NVV9 412 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 TMEM107Q6UX40 140 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 WDR75Q8IWA0 830 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 PLPPR2Q96GM1 343 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 ADGRG7Q96K78 797 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 TMEM237Q96Q45 408 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 EBPLQ9BY08 206 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 TBL1XR1Q9BZK7 514 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 GLIPR2Q9H4G4 154 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 C3orf14Q9HBI5 128 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 HHATLQ9HCP6 504 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 DDX18Q9NVP1 670 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 TMEM216Q9P0N5 145 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 STK38LQ9Y2H1 464 aa11.71□□□□□ -0.53
TRAPPC3-201ENST00000373159 A0A087WZY1 265 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 SHISA8B8ZZ34 492 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 POC1B-GALNT4F8VUJ3 575 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 IFI6P09912 130 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 ZNF17P17021 662 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 PSMB1P20618 241 aaKnown RBP11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 ATP5F1P24539 256 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 GABRA3P34903 492 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 PRKAA2P54646 552 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 ETF1P62495 437 aaKnown RBP11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 RAC1P63000 192 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 LCP2Q13094 533 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 CTU2Q2VPK5 515 aaKnown RBP11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 HEPHL1Q6MZM0 1159 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 C8orf74Q6P047 294 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 TIFABQ6ZNK6 161 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 EXOC3L1Q86VI1 746 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 LCA5Q86VQ0 697 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 SLC22A9Q8IVM8 553 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 GTPBP8Q8N3Z3 284 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 OR10D3Q8NH80 312 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 FAM76AQ8TAV0 307 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 HOXB13Q92826 284 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 AMDHD1Q96NU7 426 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 ACTR6Q9GZN1 396 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 MIEF1Q9NQG6 463 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 MCTS1Q9ULC4 181 aaKnown RBP11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 CLEC4AQ9UMR7 237 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 LAMP3Q9UQV4 416 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 TIMM22Q9Y584 194 aa11.7□□□□□ -0.54
TRAPPC3-201ENST00000373159 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 C7orf72A4D263 438 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 ALG1L2C9J202 215 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 OVOL3O00110 214 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 KCNH1O95259 989 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 SYNGR4O95473 234 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 IGKV1D-16P01601 117 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 PSMA4P25789 261 aaKnown RBP11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 NTSP30990 170 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 MAP3K8P41279 467 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 RFX3P48380 749 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 RPS4XP62701 263 aaKnown RBP11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 ETFDHQ16134 617 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 CLEC12BQ2HXU8 276 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 GRAMD1BQ3KR37 738 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 SPDYAQ5MJ70 313 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 CPTPQ5TA50 214 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms