RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 CACNG2Q9Y698 323 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 IGKV1-8A0A0C4DH67 115 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 A0A1W2PR48 441 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 SYT5O00445 386 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 SYPP08247 313 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 STAT5AP42229 794 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ZNF77Q15935 545 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 TMEM44Q2T9K0 475 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 LILRA6Q6PI73 481 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ARL9Q6T311 187 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 TMEM64Q6YI46 380 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 C12orf40Q86WS4 652 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ZNF655Q8N720 491 aaPredicted RBP15.3■□□□□ 0.04
SDC4-201ENST00000372733 OR11H4Q8NGC9 324 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ABHD1Q96SE0 405 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 SMAD5Q99717 465 aaKnown RBP15.3■□□□□ 0.04
SDC4-201ENST00000372733 ALG8Q9BVK2 526 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 FAIM2Q9BWQ8 316 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 KCNN2Q9H2S1 579 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 XKR8Q9H6D3 395 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 LRIT2A6NDA9 550 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 BTN3A3O00478 584 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 STOMP27105 288 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 NUDT1P36639 197 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ANXA11P50995 505 aaKnown RBP15.3■□□□□ 0.04
SDC4-201ENST00000372733 ZNF782Q6ZMW2 699 aaPredicted RBP15.3■□□□□ 0.04
SDC4-201ENST00000372733 ZNF765Q7L2R6 523 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 GDF7Q7Z4P5 450 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 OR2T33Q8NG76 320 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 SFXN5Q8TD22 340 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ARMC5Q96C12 935 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 VWCEQ96DN2 955 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 TIMP4Q99727 224 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 TEX12Q9BXU0 123 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 GHITMQ9H3K2 345 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 DIABLOQ9NR28 239 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ERI3O43414 337 aaKnown RBP15.3■□□□□ 0.04
SDC4-201ENST00000372733 KLF4O43474 513 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 VEGFDO43915 354 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 AIFM1O95831 613 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 FUT1P19526 365 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 CXCL3P19876 107 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ST8SIA6P61647 398 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ARHGAP19Q14CB8 494 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 C9orf64Q5T6V5 341 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 C18orf63Q68DL7 685 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 OAFQ86UD1 273 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 C7orf57Q8NEG2 295 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 SCMH1Q96GD3 660 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 MCHR1Q99705 422 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ELF5Q9UKW6 265 aaPredicted RBP15.3■□□□□ 0.04
SDC4-201ENST00000372733 CLEC4AQ9UMR7 237 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 ING4Q9UNL4 249 aa15.3■□□□□ 0.04
SDC4-201ENST00000372733 C7orf66A4D0T2 115 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 E9PI62 339 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 J3QRE1 110 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 FCMRO60667 390 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 SLC22A5O76082 557 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 PRNPP04156 253 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 ADRB3P13945 408 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 RBMS1P29558 406 aaKnown RBP15.29■□□□□ 0.04
SDC4-201ENST00000372733 PITPNBP48739 271 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 EPHA5P54756 1037 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 CLDN2P57739 230 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 TRA2BP62995 288 aaKnown RBP15.29■□□□□ 0.04
SDC4-201ENST00000372733 TGM3Q08188 693 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 ANGPT1Q15389 498 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 SFXN4Q6P4A7 337 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 GJD3Q8N144 294 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 ACBD7Q8N6N7 88 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 OR56A1Q8NGH5 318 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 OR9A2Q8NGT5 310 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 NXPE3Q969Y0 559 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 SLC41A3Q96GZ6 507 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 HCAR1Q9BXC0 346 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 MED17Q9NVC6 651 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 MARK1Q9P0L2 795 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 ENTPD4Q9Y227 616 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 LOC105369274A0A096LPK9 316 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 SCO1O75880 301 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 DHFRP00374 187 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 NDUFV2P19404 249 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 AHCYP23526 432 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 NTHL1P78549 312 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 SLC9A5Q14940 896 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 LTB4RQ15722 352 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 DECR1Q16698 335 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 ARHGAP15Q53QZ3 475 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 NIPAL3Q6P499 406 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 BHLHB9Q6PI77 547 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 TEX261Q6UWH6 196 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 C16orf62Q7Z3J2 963 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 OR4N4Q8N0Y3 316 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 OR8H3Q8N146 312 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 TRMT10AQ8TBZ6 339 aaKnown RBP15.29■□□□□ 0.04
SDC4-201ENST00000372733 PCNPQ8WW12 178 aaKnown RBP15.29■□□□□ 0.04
SDC4-201ENST00000372733 ZSWIM3Q96MP5 696 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 UBQLN3Q9H347 655 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 BABAM2Q9NXR7 383 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 MOSPD1Q9UJG1 213 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms