RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 OR1F2PQ96R84 312 aa23.2■■□□□ 1.3
CTSA-203ENST00000372459 COPS4Q9BT78 406 aa23.2■■□□□ 1.3
CTSA-203ENST00000372459 NDC1Q9BTX1 674 aa23.2■■□□□ 1.3
CTSA-203ENST00000372459 POLR2J2Q9GZM3 115 aaKnown RBP23.2■■□□□ 1.3
CTSA-203ENST00000372459 C11orf16Q9NQ32 467 aa23.2■■□□□ 1.3
CTSA-203ENST00000372459 NECTIN3Q9NQS3 549 aa23.2■■□□□ 1.3
CTSA-203ENST00000372459 KCNE5Q9UJ90 142 aa23.2■■□□□ 1.3
CTSA-203ENST00000372459 SERTAD3Q9UJW9 196 aa23.2■■□□□ 1.3
CTSA-203ENST00000372459 NPIPA5A0A0B4J1W7 369 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 CLCA1A8K7I4 914 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 NPIPA7E9PJI5 369 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 NPIPA8P0DM63 369 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 PGDP52209 483 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 FUT7Q11130 342 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 FLYWCH1Q4VC44 716 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 TOR1AIP2Q8NFQ8 470 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 PIGKQ92643 395 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 HSPBAP1Q96EW2 488 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 TBC1D23Q9NUY8 699 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 TBCCD1Q9NVR7 557 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 ERVK-19Q9WJR5 959 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 NTNG1Q9Y2I2 539 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 MMACHCQ9Y4U1 282 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 CACNA1EQ15878 2313 aa23.19■■□□□ 1.3
CTSA-203ENST00000372459 hCG_2014768A0A024R1R8 64 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 CDHR4A6H8M9 788 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 M0R129 80 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 INMTO95050 263 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 TP53P04637 393 aaPredicted RBP23.18■■□□□ 1.3
CTSA-203ENST00000372459 IGFBP1P08833 259 aaPredicted RBP23.18■■□□□ 1.3
CTSA-203ENST00000372459 OR1D4P47884 311 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 ZNF136P52737 540 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 LSM11P83369 360 aaKnown RBP eCLIP23.18■■□□□ 1.33e-9■□□□□ 10.6
CTSA-203ENST00000372459 CSTF1Q05048 431 aaKnown RBP23.18■■□□□ 1.3
CTSA-203ENST00000372459 TMED1Q13445 227 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 NR0B2Q15466 257 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 DECR1Q16698 335 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 MED25Q71SY5 747 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 GDF7Q7Z4P5 450 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 ACOT11Q8WXI4 607 aaPredicted RBP23.18■■□□□ 1.3
CTSA-203ENST00000372459 EDAQ92838 391 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 SIGLEC11Q96RL6 698 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 NUDT22Q9BRQ3 303 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 ZNF768Q9H5H4 540 aaKnown RBP23.18■■□□□ 1.3
CTSA-203ENST00000372459 LANCL2Q9NS86 450 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 CLN6Q9NWW5 311 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 DHCR7Q9UBM7 475 aaKnown RBP23.18■■□□□ 1.3
CTSA-203ENST00000372459 SLC6A14Q9UN76 642 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 SH3D21A4FU49 640 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 TNNI3P19429 210 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 MAP2K4P45985 399 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 GCGRP47871 477 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 MOGQ16653 247 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 C12orf73Q69YU5 71 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 ZC3H14Q6PJT7 736 aaKnown RBP23.18■■□□□ 1.3
CTSA-203ENST00000372459 CASP12Q6UXS9 341 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 OR4C6Q8NH72 309 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 SAP25Q8TEE9 199 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 GGHQ92820 318 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 PTCHD1Q96NR3 888 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 OR10A5Q9H207 317 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 EVA1AQ9H8M9 152 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 FKBP14Q9NWM8 211 aa23.18■■□□□ 1.3
CTSA-203ENST00000372459 WARS2Q9UGM6 360 aaKnown RBP23.18■■□□□ 1.3
CTSA-203ENST00000372459 CABIN1Q9Y6J0 2220 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 RFX3P48380 749 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 GP2P55259 537 aaKnown RBP23.17■■□□□ 1.3
CTSA-203ENST00000372459 RAB15P59190 212 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 HLA-BQ31612 363 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 CCDC81Q6ZN84 652 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 Q6ZNX1 250 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 PRICKLE2Q7Z3G6 844 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 NKAIN4Q8IVV8 208 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 PIGXQ8TBF5 258 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 TRUB1Q8WWH5 349 aaKnown RBP23.17■■□□□ 1.3
CTSA-203ENST00000372459 GPA33Q99795 319 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 Q9N2J8 555 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 AMBNQ9NP70 447 aa23.17■■□□□ 1.3
CTSA-203ENST00000372459 ARID1BQ8NFD5 2236 aaPredicted RBP23.17■■□□□ 1.3
CTSA-203ENST00000372459 LAMA1P25391 3075 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 TOX3O15405 576 aaPredicted RBP23.16■■□□□ 1.3
CTSA-203ENST00000372459 FADS2O95864 444 aaKnown RBP23.16■■□□□ 1.3
CTSA-203ENST00000372459 ATXN8OSP0DMR3 200 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 MASP1P48740 699 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 NUDT6P53370 316 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 TMEM71Q6P5X7 295 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 ZAR1Q86SH2 424 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 PALMDQ9NP74 551 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 ACOT13Q9NPJ3 140 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 DTX4Q9Y2E6 619 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 UNC13CQ8NB66 2214 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 TTC36A6NLP5 189 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 BCL10O95999 233 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 THY1P04216 161 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 SNRPGP62308 76 aaKnown RBP23.16■■□□□ 1.3
CTSA-203ENST00000372459 YOD1Q5VVQ6 348 aaPredicted RBP23.16■■□□□ 1.3
CTSA-203ENST00000372459 C16orf52Q8NHV5 167 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.16■■□□□ 1.3
CTSA-203ENST00000372459 PRODH2Q9UF12 536 aa23.16■■□□□ 1.3
CTSA-203ENST00000372459 SLC7A7Q9UM01 511 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms