RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 REEP5Q00765 189 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 PLIN5Q00G26 463 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF45Q02386 682 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 EEF1A2Q05639 463 aaKnown RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 MFAP5Q13361 173 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 MAD2L1BPQ15013 274 aaPredicted RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF630Q2M218 657 aaPredicted RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 MINDY4Q4G0A6 757 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 IFI44LQ53G44 452 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 OR4F3Q6IEY1 312 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 MED27Q6P2C8 311 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 TMEM205Q6UW68 189 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 NXPE4Q6UWF7 544 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 IGFL2Q6UWQ7 119 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 Q6ZS92 163 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 USP43Q70EL4 1123 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 IKBIPQ70UQ0 350 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 KRT78Q8N1N4 520 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 LINC00471Q8N535 108 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 SLC15A4Q8N697 577 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 OR51Q1Q8NH59 317 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 WDR20Q8TBZ3 569 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 NT5CQ8TCD5 201 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 RASSF5Q8WWW0 418 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 NEIL2Q969S2 332 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 APIPQ96GX9 242 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 Q96MT0 163 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 QRFPRQ96P65 431 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 OR4K3Q96R72 315 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 OR1F2PQ96R84 312 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 LMF1Q96S06 567 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 MAPKAP1Q9BPZ7 522 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 ITPAQ9BY32 194 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 PITHD1Q9GZP4 211 aaPredicted RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 REXO4Q9GZR2 422 aaKnown RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF700Q9H0M5 742 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 TMEM38AQ9H6F2 299 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 SP140LQ9H930 580 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 SYNPO2LQ9H987 977 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 SH2B3Q9UQQ2 575 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 MDC1Q14676 2089 aaKnown RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 CCDC88CQ9P219 2028 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 PRRC2CQ9Y520 2896 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 hCG_2014768A0A024R1R8 64 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 SGK494L7N484 410 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 SCAMP2O15127 329 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 SCN2BO60939 215 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 KLHL18O94889 574 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 NADKO95544 446 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 CPSF4O95639 269 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 STATHP02808 62 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 SERPINA7P05543 415 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 ANXA4P09525 319 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 IL7RP16871 459 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 ALOX12P18054 663 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 EPORP19235 508 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF10P21506 573 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 RRM2P31350 389 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 S100A5P33763 92 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 SOX11P35716 441 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 XCR1P46094 333 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 PRIM2P49643 509 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 CLK1P49759 484 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 HMGA2P52926 109 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 STXBP1P61764 594 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 RPP38P78345 283 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 MEF2AQ02078 507 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 MRPL49Q13405 166 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 CTF1Q16619 201 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 SYT16Q17RD7 645 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF181Q2M3W8 571 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 CTU2Q2VPK5 515 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 CATSPEREQ5SY80 951 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 B3GNTL1Q67FW5 361 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 FAAH2Q6GMR7 532 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 GDPGP1Q6ZNW5 385 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 ARMC8Q8IUR7 673 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 TMEM151BQ8IW70 566 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 KCT2Q8NC54 265 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 KBTBD8Q8NFY9 601 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 OR52N2Q8NGI0 321 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 OR6Q1Q8NGQ2 317 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 EFHD2Q96C19 240 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 C8orf44Q96CB5 159 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 LGALS12Q96DT0 336 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 WDR34Q96EX3 536 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 DACH2Q96NX9 599 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 COL21A1Q96P44 957 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 HBEGFQ99075 208 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 DGCR6LQ9BY27 220 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 IKZF5Q9H5V7 419 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 REEP4Q9H6H4 257 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 ACOT13Q9NPJ3 140 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 CNOT2Q9NZN8 540 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 HCN3Q9P1Z3 774 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 TEKT2Q9UIF3 430 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 DLGAP4Q9Y2H0 992 aa9.65□□□□□ -0.86
COL5A1-202ENST00000371820 MRPS2Q9Y399 296 aaKnown RBP9.65□□□□□ -0.86
COL5A1-202ENST00000371820 PCDHGA10Q9Y5H3 936 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms