RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 FANCMQ8IYD8 2048 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 STK25O00506 426 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 PLD2O14939 933 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 PLOD3O60568 738 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 CDRT1O95170 752 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 DBIP07108 87 aaKnown RBP26.94■■□□□ 1.9
SSBP3-204ENST00000371320 PTNP21246 168 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 RABIFP47224 123 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 UBE2IP63279 158 aaKnown RBP26.94■■□□□ 1.9
SSBP3-204ENST00000371320 KRR1Q13601 381 aaKnown RBP26.94■■□□□ 1.9
SSBP3-204ENST00000371320 TMEM44Q2T9K0 475 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 RNF44Q7L0R7 432 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 SFTPA2Q8IWL1 248 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 COX18Q8N8Q8 333 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 CDRT4Q8N9R6 151 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 TM9SF4Q92544 642 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 ISYNA1Q9NPH2 558 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 DUSP22Q9NRW4 184 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 MED17Q9NVC6 651 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 CD207Q9UJ71 328 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 CDH10Q9Y6N8 788 aa26.94■■□□□ 1.9
SSBP3-204ENST00000371320 CEP290O15078 2479 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 FAM221BA6H8Z2 402 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 CYR61O00622 381 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 DEFA1P59665 94 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 DEFA3P59666 94 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 MXD1Q05195 221 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 MANEAQ5SRI9 462 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 AADACL4Q5VUY2 407 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 CSNK1A1LQ8N752 337 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 CCDC32Q9BV29 185 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 GSDMCQ9BYG8 508 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 RERGLQ9H628 205 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 IL21RQ9HBE5 538 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 IL20RAQ9UHF4 553 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 SATB2Q9UPW6 733 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 ARHGEF17Q96PE2 2063 aaPredicted RBP26.93■■□□□ 1.9
SSBP3-204ENST00000371320 LIMS3P0CW19 117 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 LIMS4P0CW20 117 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 CBX3Q13185 183 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 TPBGQ13641 420 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 PLK5Q496M5 336 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 EXOSC6Q5RKV6 272 aaKnown RBP26.93■■□□□ 1.9
SSBP3-204ENST00000371320 C22orf42Q6IC83 251 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 OR2T33Q8NG76 320 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 UFD1Q92890 307 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 SDHCQ99643 169 aaPredicted RBP26.93■■□□□ 1.9
SSBP3-204ENST00000371320 TRPV5Q9NQA5 729 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 ERVK13-1Q9NX77 482 aa26.93■■□□□ 1.9
SSBP3-204ENST00000371320 TRAPPC13A5PLN9 417 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 CDC42EP2O14613 210 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 AQP9O43315 295 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 GALR3O60755 368 aaPredicted RBP26.92■■□□□ 1.9
SSBP3-204ENST00000371320 IL1AP01583 271 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 PRG2P13727 222 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 RPS4Y1P22090 263 aaKnown RBP26.92■■□□□ 1.9
SSBP3-204ENST00000371320 ZNF542PQ5EBM4 170 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 ABI3BPQ7Z7G0 1075 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 GPR151Q8TDV0 419 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 SLC37A2Q8TED4 501 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 SLC25A46Q96AG3 418 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 C1GALT1C1Q96EU7 318 aa26.92■■□□□ 1.9
SSBP3-204ENST00000371320 PRAMEF26H0Y7S4 382 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 GKN3PP0CG01 181 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 NID1P14543 1247 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 EIF2B2P49770 351 aaKnown RBP26.91■■□□□ 1.9
SSBP3-204ENST00000371320 VSX2P58304 361 aaPredicted RBP26.91■■□□□ 1.9
SSBP3-204ENST00000371320 MRPL2Q5T653 305 aaKnown RBP26.91■■□□□ 1.9
SSBP3-204ENST00000371320 CA13Q8N1Q1 262 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 HPS1Q92902 700 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 SAMD8Q96LT4 415 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 STACQ99469 402 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 FBXO34Q9NWN3 711 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 MMP17Q9ULZ9 603 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 YARS2Q9Y2Z4 477 aaKnown RBP26.91■■□□□ 1.9
SSBP3-204ENST00000371320 HMGN1P05114 100 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 CELA2BP08218 269 aaPredicted RBP26.91■■□□□ 1.9
SSBP3-204ENST00000371320 SPNP16150 400 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 TGM4P49221 684 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 RPS25P62851 125 aaKnown RBP26.91■■□□□ 1.9
SSBP3-204ENST00000371320 EXOSC7Q15024 291 aaKnown RBP26.91■■□□□ 1.9
SSBP3-204ENST00000371320 PRICKLE4Q2TBC4 344 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 ZCCHC12Q6PEW1 402 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 LHFPL3Q86UP9 236 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 CLDN22Q8N7P3 220 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 FRMD1Q8N878 549 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 CCDC3Q9BQI4 270 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 PRSS27Q9BQR3 290 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 TOR4AQ9NXH8 423 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 MAT2BQ9NZL9 334 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 CLCA2Q9UQC9 943 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 TRAPPC4Q9Y296 219 aa26.91■■□□□ 1.9
SSBP3-204ENST00000371320 NPIPA5A0A0B4J1W7 369 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 KIR2DS5A0A0G2JLQ3 304 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 A0A0G2JNG1 304 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 IQCMA0A1B0GVH7 501 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 NPIPA7E9PJI5 369 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 KIR2DS3K7RE56 304 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 PEX12O00623 359 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 SLC30A4O14863 429 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms