RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 THUMPD1Q9NXG2 353 aaKnown RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 SIDT1Q9NXL6 827 aaKnown RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 C5AR2Q9P296 337 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 CES1P1Q9UKY3 287 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 CNOT11Q9UKZ1 510 aaKnown RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 PLCL2Q9UPR0 1127 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 MN1Q10571 1320 aaPredicted RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 GALR3O60755 368 aaPredicted RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 PRAMEF10O60809 474 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ERAL1O75616 437 aaKnown RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 SERPINA1P01009 418 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 C9P02748 559 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ACP1P24666 158 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 RBMS1P29558 406 aaKnown RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 CD97P48960 835 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ANXA11P50995 505 aaKnown RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 GFERP55789 205 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 HABP2Q14520 560 aaPredicted RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 TAF11Q15544 211 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ZNF630Q2M218 657 aaPredicted RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 PRTGQ2VWP7 1150 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 DEFB110Q30KQ9 67 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 SPDYE7PQ495Y7 208 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 C18orf63Q68DL7 685 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 WDR74Q6RFH5 385 aaPredicted RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 IZUMO2Q6UXV1 221 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 RPTNQ6XPR3 784 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 KMT5CQ86Y97 462 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ANKFN1Q8N957 763 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 OR4C6Q8NH72 309 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 OR5AK3PQ8NH89 298 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 SAP25Q8TEE9 199 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 EME1Q96AY2 570 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ZNF285Q96NJ3 590 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 EPS8L2Q9H6S3 715 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 C8orf4Q9NR00 106 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 SIRT3Q9NTG7 399 aaPredicted RBP8.15□□□□□ -1.11
TPM3-213ENST00000368545 ZDHHC8Q9ULC8 765 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 DTNAQ9Y4J8 743 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ADAMTS9Q9P2N4 1935 aa8.15□□□□□ -1.11
TPM3-213ENST00000368545 ACACAQ13085 2346 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 A0A087X0M5 115 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 A0A1B0GX30 115 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 FAM149AA5PLN7 773 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 GLOD5A6NK44 160 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 PGRMC2O15173 223 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 KLK10O43240 276 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CD8BP10966 210 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CKMT2P17540 419 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 KDELR2P33947 212 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CASRP41180 1078 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 HSPA13P48723 471 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 FAM53BQ14153 422 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 ATP6AP1Q15904 470 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 LRRC23Q53EV4 343 aaPredicted RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 FAM205BPQ63HN1 556 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 LPCAT4Q643R3 524 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CD300LDQ6UXZ3 194 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 PRSS42Q7Z5A4 293 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 RNF130Q86XS8 419 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 PDSS2Q86YH6 399 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 ZDHHC13Q8IUH4 622 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 LRRC25Q8N386 305 aaPredicted RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 SLC15A4Q8N697 577 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 STPG3Q8N7X2 389 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 ICA1LQ8NDH6 482 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 OR4K14Q8NGD5 310 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 OR56A1Q8NGH5 318 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 FBXO30Q8TB52 745 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 N4BP2L2Q92802 583 aaPredicted RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 CNRIP1Q96F85 164 aaPredicted RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 SLC47A1Q96FL8 570 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CENPNQ96H22 339 aaPredicted RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 SEPHS2Q99611 448 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CLK4Q9HAZ1 481 aaKnown RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 ANGPT4Q9Y264 503 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 NAALAD2Q9Y3Q0 740 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 IGHV5-51A0A0C4DH38 117 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 A0A1W2PRQ8 180 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 TMEM247A6NEH6 219 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 TOX3O15405 576 aaPredicted RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 PRKRAO75569 313 aaKnown RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 ITGA10O75578 1167 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 MT-CO3P00414 261 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 FHP07954 510 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 ETFAP13804 333 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 ATP6V1C1P21283 382 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 PPP2R1BP30154 601 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 GABRA4P48169 554 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CCT3P49368 545 aaKnown RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 CDK9P50750 372 aaKnown RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 RAB38P57729 211 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 OR1D5P58170 312 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 DSTNP60981 165 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 HSD11B2P80365 405 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 RUNX2Q13950 521 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 LRRC36Q1X8D7 754 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 TMTC4Q5T4D3 741 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 SPRED1Q7Z699 444 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms