RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 SOCS6O14544 535 aa16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 FPR3P25089 353 aa16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 CDC73Q6P1J9 531 aa16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 PRSS41Q7RTY9 318 aa16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 SCARF2Q96GP6 870 aaPredicted RBP16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 WDFY2Q96P53 400 aa16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 OR2A5Q96R48 311 aa16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 HOXD1Q9GZZ0 328 aa16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 MMP28Q9H239 520 aa16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 MRPS2Q9Y399 296 aaKnown RBP16.88■□□□□ 0.29
UBQLN4-201ENST00000368309 A0A1W2PQF6 199 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 STK25O00506 426 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 NCR1O76036 304 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 HOXB2P14652 356 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 ARFIP1P53367 373 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 TFF2Q03403 129 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 SLC35F1Q5T1Q4 408 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 SMARCD3Q6STE5 483 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 CPOQ8IVL8 374 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 GJD3Q8N144 294 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 CLDN22Q8N7P3 220 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 ART5Q96L15 291 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 SECISBP2Q96T21 854 aaKnown RBP16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 A8MV72 311 aaPredicted RBP16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 CASKO14936 926 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 RCVRNP35243 200 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 STAT5AP42229 794 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 GLYR1Q49A26 553 aaPredicted RBP16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 SDE2Q6IQ49 451 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 ANKRD54Q6NXT1 300 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 MBOAT2Q6ZWT7 520 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 SDF2Q99470 211 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 ZC3H12DA2A288 527 aaKnown RBP16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 SLC35F4A4IF30 521 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 LRRC72A6NJI9 287 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 LAMP2P13473 410 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 PVRP15151 417 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 PGGHGQ32M88 737 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 ZNF620Q6ZNG0 422 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 QSOX2Q6ZRP7 698 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 PATE1Q8WXA2 126 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 MSLNLQ96KJ4 702 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 PRRG3Q9BZD7 231 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 DPH1Q9BZG8 443 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 ENKD1Q9H0I2 346 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 MED20Q9H944 212 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 CAPN10Q9HC96 672 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 MALT1Q9UDY8 824 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 GSTK1Q9Y2Q3 226 aa16.87■□□□□ 0.29
UBQLN4-201ENST00000368309 EPOPA6NHQ4 379 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 KLF8O95600 359 aaPredicted RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 GSTT2P0CG29 244 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 GSTT2BP0CG30 244 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 HTR3AP46098 478 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 COPZ1P61923 177 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 SUZ12Q15022 739 aaKnown RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 PDZK1Q5T2W1 519 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 DDI2Q5TDH0 399 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 GATAD2AQ86YP4 633 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 ZNF485Q8NCK3 441 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 NLGN4YQ8NFZ3 816 aaPredicted RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 RFKQ969G6 155 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 SIPA1Q96FS4 1042 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 TRIM45Q9H8W5 580 aaPredicted RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 HINT3Q9NQE9 182 aaKnown RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 H2AFY2Q9P0M6 372 aaPredicted RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 DAPP1Q9UN19 280 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 IRGMA1A4Y4 181 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 OR6C74A6NCV1 312 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 GABRA5P31644 462 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 GCGRP47871 477 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 SF3B4Q15427 424 aaKnown RBP eCLIP16.86■□□□□ 0.292e-7■■■■□ 24.8
UBQLN4-201ENST00000368309 PYDC2Q56P42 97 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 SFTPA2Q8IWL1 248 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 UBQLNLQ8IYU4 475 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 OR2L13Q8N349 312 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 CAPSLQ8WWF8 208 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 CACYBPQ9HB71 228 aaKnown RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 PCDHGB2Q9Y5G2 931 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 C2orf92A0A1B0GVN3 265 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 PEX12O00623 359 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 ACSL1P33121 698 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 ZNF155Q12901 538 aaPredicted RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 ZNF517Q6ZMY9 492 aaPredicted RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 SLC7A5P1Q8MH63 180 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 POGLUT1Q8NBL1 392 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 OR2T33Q8NG76 320 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 OR5T3Q8NGG3 340 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 OR51G2Q8NGK0 314 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 FLVCR1-AS1Q8TAF5 88 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 SPRYD4Q8WW59 207 aaPredicted RBP16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 TEX12Q9BXU0 123 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 ATP13A2Q9NQ11 1180 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 NLGN3Q9NZ94 848 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 CBLCQ9ULV8 474 aa16.86■□□□□ 0.29
UBQLN4-201ENST00000368309 ARHGEF17Q96PE2 2063 aaPredicted RBP16.85■□□□□ 0.29
UBQLN4-201ENST00000368309 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.85■□□□□ 0.29
UBQLN4-201ENST00000368309 KLF4O43474 513 aa16.85■□□□□ 0.29
UBQLN4-201ENST00000368309 B3GALT2O43825 422 aa16.85■□□□□ 0.29
UBQLN4-201ENST00000368309 CSF2P04141 144 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms