RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SCAMP2O15127 329 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 EMC8O43402 210 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 KCNK2O95069 426 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 KCNH1O95259 989 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CRHP06850 196 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 EPXP11678 715 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 HK1P19367 917 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TBXA2RP21731 343 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GPC1P35052 558 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 PCYT1AP49585 367 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 DIO3P55073 304 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TPD52P55327 224 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 EEF1A1P68104 462 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 OCRLQ01968 901 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 IFFO1Q0D2I5 559 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 DUSP5Q16690 384 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 VPS26BQ4G0F5 336 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 EEF1A1P5Q5VTE0 462 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 R3HCC1LQ7Z5L2 792 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ZAR1Q86SH2 424 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 KIF18BQ86Y91 864 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 RIMKLAQ8IXN7 391 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 OR7A2PQ8NGA2 310 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GOT1L1Q8NHS2 421 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GPR151Q8TDV0 419 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 NUDT8Q8WV74 236 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 NINJ1Q92982 152 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 COQ8BQ96D53 544 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 FAM120BQ96EK7 910 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 RMND5BQ96G75 393 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 C16orf58Q96GQ5 468 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 MS4A4EQ96PG1 132 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 POLDIP3Q9BY77 421 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CXXC4Q9H2H0 198 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ACBD3Q9H3P7 528 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 PIGMQ9H3S5 423 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 EQTNQ9NQ60 294 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 FBXO34Q9NWN3 711 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GIN1Q9NXP7 522 aa12.34□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ZFHX3Q15911 3703 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 A0A1W2PNV4 684 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 TUBAL3A6NHL2 446 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 TMEM114B3SHH9 223 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 EEF1E1-BLOC1S5C9J1V9 151 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 EEF1E1O43324 174 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 PEX11AO75192 247 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 TNFRSF21O75509 655 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 SLU7O95391 586 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 OXSR1O95747 527 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 LAMP1P11279 417 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 TCEA1P23193 301 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 LCN1P31025 176 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 CLK3P49761 638 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 IST1P53990 364 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 PRKAG1P54619 331 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 STX5Q13190 355 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 PTGR1Q14914 329 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 GUSBP1Q15486 140 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 TNFAIP8L3Q5GJ75 292 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 CDC20BQ86Y33 519 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 GCNT2Q8N0V5 402 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 LINC01560Q8TB33 94 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 STARD4Q96DR4 205 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 PIGQQ9BRB3 760 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 RBM24Q9BX46 236 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 CLEC4MQ9H2X3 399 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 PTGES2Q9H7Z7 377 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 GALNT8Q9NY28 637 aa12.33□□□□□ -0.44
TNFRSF1A-202ENST00000366159 MPDZO75970 2070 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 A0A1W2PRB8 838 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 LYPLA1O75608 230 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 CGAP01215 116 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 EFNA1P20827 205 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 PSMA4P25789 261 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 MAPK1P28482 360 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 RPL3P39023 403 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 KIR2DL2P43627 348 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 RFX3P48380 749 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 CLDN20P56880 219 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 C21orf58P58505 322 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 ZNF844Q08AG5 666 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 RAET1LQ5VY80 246 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 GALNT10Q86SR1 603 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 GGNQ86UU5 652 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 GRAMD2AQ8IUY3 354 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 METTL25Q8N6Q8 603 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 OR5M1Q8NGP8 315 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 AGR3Q8TD06 166 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 FIG4Q92562 907 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 SLC9A6Q92581 669 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 NPAS1Q99742 590 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 TBL1XR1Q9BZK7 514 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 C20orf27Q9GZN8 174 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 SSU72Q9NP77 194 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 DUSP22Q9NRW4 184 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 ST6GALNAC2Q9UJ37 374 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 AP4B1Q9Y6B7 739 aa12.32□□□□□ -0.44
TNFRSF1A-202ENST00000366159 MED13LQ71F56 2210 aa12.31□□□□□ -0.44
TNFRSF1A-202ENST00000366159 A0A1W2PQD3 144 aa12.31□□□□□ -0.44
TNFRSF1A-202ENST00000366159 C7orf72A4D263 438 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms