RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 B4GALT2O60909 372 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 LDOC1O95751 146 aaPredicted RBP12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 GPR75O95800 540 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 FHP07954 510 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 CPMP14384 443 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 TNFRSF1BP20333 461 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 ALAS2P22557 587 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 NUDT6P53370 316 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 DSTNP60981 165 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 MAT1AQ00266 395 aaKnown RBP12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 EEF1A2Q05639 463 aaKnown RBP12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 IRF3Q14653 427 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 CCDC92Q53HC0 331 aaPredicted RBP12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 YOD1Q5VVQ6 348 aaPredicted RBP12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 CEACAM20Q6UY09 585 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 TTLL10Q6ZVT0 673 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 OR4N5Q8IXE1 308 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 POC5Q8NA72 575 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 OR9A2Q8NGT5 310 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 RHBDD1Q8TEB9 315 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 EFHD2Q96C19 240 aaPredicted RBP12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 SLC35G5Q96KT7 338 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 CDCA4Q9BXL8 241 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 ACER3Q9NUN7 267 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 MKLN1Q9UL63 735 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 NUP210LQ5VU65 1888 aa12.27□□□□□ -0.45
SQSTM1-201ENST00000360718 EMC8O43402 210 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 TBX1O43435 398 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 LDB3O75112 727 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 PTTG1O95997 202 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 IFNW1P05000 195 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF806P0C7X5 589 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 ARAFP10398 606 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 SPEM2Q0P670 501 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 PTGES3Q15185 160 aaKnown RBP12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 TMEM107Q6UX40 140 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 TAGAPQ8N103 731 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 PEX11GQ96HA9 241 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 IFT52Q9Y366 437 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 MUC6Q6W4X9 2439 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 CD59P13987 128 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 GCGRP47871 477 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 LIMS1P48059 325 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 PRKAG1P54619 331 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 DEFA1P59665 94 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 DEFA3P59666 94 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 SLC13A2Q13183 592 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 PTCHD4Q6ZW05 846 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF595Q8IYB9 648 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 B3GNT7Q8NFL0 401 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 OR9Q2Q8NGE9 314 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF501Q96CX3 271 aaPredicted RBP12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 ELP4Q96EB1 424 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 CCDC74BQ96LY2 380 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 CDADC1Q9BWV3 514 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 RBCK1Q9BYM8 510 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 SLC7A5P2Q9GIP4 190 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 POLE4Q9NR33 117 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 FTSJ1Q9UET6 329 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 CFL2Q9Y281 166 aa12.26□□□□□ -0.45
SQSTM1-201ENST00000360718 HTR3EA5X5Y0 456 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 C5orf58C9J3I9 102 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 LOC110117498-PIK3R3F6TDL0 507 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PCDH17O14917 1159 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 DSCR3O14972 297 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 FGF17O60258 216 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 SLITRK5O94991 958 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 SNX4O95219 450 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 DLGAP3O95886 979 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PTHP01270 115 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 HSMCR30P0CW71 290 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 CBLP22681 906 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 MC3RP41968 323 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 CRISP1P54107 249 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 UGT2B15P54855 530 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PCBP3P57721 371 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 ID2Q02363 134 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PHF19Q5T6S3 580 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 C1QTNF12Q5T7M4 302 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 REEP3Q6NUK4 255 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 TNFAIP8L2Q6P589 184 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 SCAIQ8N9R8 606 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 AQP11Q8NBQ7 271 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PIK3R3Q92569 461 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 GTPBP3Q969Y2 492 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 Q96MT0 163 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 CHCHD6Q9BRQ6 235 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 YIPF2Q9BWQ6 316 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 OR51E2Q9H255 320 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 DHCR7Q9UBM7 475 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 TRPC4Q9UBN4 977 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 TMCC3Q9ULS5 477 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 SRPK3Q9UPE1 567 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 KIF26BQ2KJY2 2108 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 ZAR1LA6NP61 321 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 NTN3O00634 580 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 GDF9O60383 454 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 APOA1P02647 267 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms