RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NME4O00746 187 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 SDC3O75056 442 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 PTGER1P34995 402 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 CDK5R2Q13319 367 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 OR9K2Q8NGE7 335 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 OR5B2Q96R09 309 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 USB1Q9BQ65 265 aaKnown RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 PRMT8Q9NR22 394 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 MED16Q9Y2X0 877 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 K7ERQ8 282 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 B4GAT1O43505 415 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 SOCS5O75159 536 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 EDN3P14138 238 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF43P17038 809 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 RAB28P51157 221 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 ADARB1P78563 741 aaKnown RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 C3P1Q6ZMU1 363 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 SUCNR1Q9BXA5 334 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 MYO5BQ9ULV0 1848 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 FRS3O43559 492 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 STK17BO94768 372 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 P04436 131 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 RNH1P13489 461 aaKnown RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 TMEM11P17152 192 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 RAB3AP20336 220 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 WNT4P56705 351 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 BTN1A1Q13410 526 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 PIN1Q13526 163 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 NSDHLQ15738 373 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 C6orf132Q5T0Z8 1188 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF689Q96CS4 500 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 BOCQ9BWV1 1114 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 TXNL4BQ9NX01 149 aaKnown RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 PCDHGA7Q9Y5G6 932 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 EPOP01588 193 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 OPN1LWP04000 364 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 SERPINE2P07093 398 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 MGST1P10620 155 aaKnown RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 ERVPABLB-1P60509 514 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 GALNT1Q10472 559 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 SFRP5Q5T4F7 317 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 HIST2H3PS2Q5TEC6 136 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 KLHDC8AQ8IYD2 350 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 MS4A15Q8N5U1 240 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 WDR92Q96MX6 357 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 MED6O75586 246 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 DBHP09172 617 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 CLDN8P56748 225 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 LARP4Q71RC2 724 aaKnown RBP eCLIP15.17■□□□□ 0.022e-8■□□□□ 8.8
COL18A1-203ENST00000359759 ZFP82Q8N141 532 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 OR9A2Q8NGT5 310 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 SPTSSAQ969W0 71 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 BSCL2Q96G97 398 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 STARD5Q9NSY2 213 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 SIX4Q9UIU6 781 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 PLEKHM1Q9Y4G2 1056 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 ADGRB2O60241 1585 aa15.17■□□□□ 0.02
COL18A1-203ENST00000359759 RPS10-NUDT3A0A1W2PQS6 291 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 IMPA2O14732 288 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 GIFP27352 417 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 HLA-DMAP28067 261 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 RPS10P46783 165 aaKnown RBP15.16■□□□□ 0.02
COL18A1-203ENST00000359759 GAB1Q13480 694 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 SMAD2Q15796 467 aaKnown RBP15.16■□□□□ 0.02
COL18A1-203ENST00000359759 OR52E8Q6IFG1 317 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 MCATQ8IVS2 390 aaKnown RBP15.16■□□□□ 0.02
COL18A1-203ENST00000359759 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 RSC1A1Q92681 617 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 ELF4Q99607 663 aaPredicted RBP15.16■□□□□ 0.02
COL18A1-203ENST00000359759 HSPE1-MOB4S4R3N1 261 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 ARSBP15848 533 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF461Q8TAF7 563 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 FNDC9Q8TBE3 224 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 SPHK2Q9NRA0 654 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 KLHL13Q9P2N7 655 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 DUX1O43812 170 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 GYPBP06028 91 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 BPIP17213 487 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 RAB5CP51148 216 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 RGNQ15493 299 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 PCNPQ8WW12 178 aaKnown RBP15.16■□□□□ 0.02
COL18A1-203ENST00000359759 SNAPC3Q92966 411 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 TEPSINQ96N21 525 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 PPA2Q9H2U2 334 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 NME7Q9Y5B8 376 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 IGKV6D-41A0A0C4DH26 115 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 TSPAN11A1L157 253 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 JRKO75564 520 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 CYCSP99999 105 aaKnown RBP15.16■□□□□ 0.02
COL18A1-203ENST00000359759 HNF4GQ14541 408 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 NDUFAF5Q5TEU4 345 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 CST9LP1Q5W188 147 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 LCN8Q6JVE9 175 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 B3GNT7Q8NFL0 401 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 SFXN5Q8TD22 340 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 C22orf15Q8WYQ4 148 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 ACTRT3Q9BYD9 372 aa15.16■□□□□ 0.02
COL18A1-203ENST00000359759 TCEAL2Q9H3H9 227 aaPredicted RBP15.16■□□□□ 0.02
COL18A1-203ENST00000359759 DNAJC15Q9Y5T4 150 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms