RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 IGLV3-10A0A075B6K4 115 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 TCRBV21S2A2A0A5A6 115 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 KIAA0355O15063 1070 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 KLK3P07288 261 aaPredicted RBP12.93□□□□□ -0.34
VCP-201ENST00000358901 HIST1H1TP22492 207 aaPredicted RBP12.93□□□□□ -0.34
VCP-201ENST00000358901 UGT2B10P36537 528 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 PGFP49763 221 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 RIDAP52758 137 aaKnown RBP12.93□□□□□ -0.34
VCP-201ENST00000358901 ELOCQ15369 112 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 ACSM3Q53FZ2 586 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 GARNL3Q5VVW2 1013 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 OR5T2Q8NGG2 359 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 STOML3Q8TAV4 291 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 SFXN1Q9H9B4 322 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 RASD1Q9Y272 281 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 PADI2Q9Y2J8 665 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 ZNF888P0CJ79 500 aaPredicted RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 CCNOP22674 350 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 MLLT11Q13015 90 aaPredicted RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 ARHGAP19Q14CB8 494 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 GGTA1PQ4G0N0 100 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 VRK3Q8IV63 474 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 L3MBTL4Q8NA19 623 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 CCDC54Q8NEL0 328 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 SDR9C7Q8NEX9 313 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 SLC38A5Q8WUX1 472 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 SGCDQ92629 289 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 THAP7Q9BT49 309 aaPredicted RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 OR52D1Q9H346 318 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 TNFRSF12AQ9NP84 129 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 PSORS1C1Q9UIG5 152 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 CCDC85CA6NKD9 419 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 GLP1RP43220 463 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 ADARB1P78563 741 aaKnown RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 SLC7A9P82251 487 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 TAP2Q03519 686 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 SGCAQ16586 387 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 NKAPLQ5M9Q1 402 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 OR2A12Q8NGT7 310 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 BPIFA2Q96DR5 249 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 ZDHHC12Q96GR4 267 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 HRASLS5Q96KN8 279 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 DHRS1Q96LJ7 313 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 KCMF1Q9P0J7 381 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 SLC16A6O15403 523 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 TRAPPC6AO75865 159 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 SEC14L2O76054 403 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 FUT1P19526 365 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 PGCP20142 388 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 PRKXP51817 358 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 GALK2Q01415 458 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 SF3A2Q15428 464 aaKnown RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 TATDN3Q17R31 274 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 FOXB2Q5VYV0 432 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 STEAP3Q658P3 488 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 VRK2Q86Y07 508 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 CDS1Q92903 461 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 ELMOD3Q96FG2 381 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 ZNF701Q9NV72 531 aaPredicted RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 TAPBPO15533 448 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 RAD1O60671 282 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 GABARAPO95166 117 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 CLUP10909 449 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 PVALBP20472 110 aaPredicted RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 HHEXQ03014 270 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 DLEU7Q6UYE1 221 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 Q6ZNX1 250 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 ZER1Q7Z7L7 766 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 OR52E1Q8NGJ3 308 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 WDR77Q9BQA1 342 aaPredicted RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 TEX10Q9NXF1 929 aaPredicted RBP12.92□□□□□ -0.34
VCP-201ENST00000358901 NME7Q9Y5B8 376 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 EVPLQ92817 2033 aa12.92□□□□□ -0.34
VCP-201ENST00000358901 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
VCP-201ENST00000358901 FAM227AF5H4B4 570 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ANKRD28O15084 1053 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 LDB3O75112 727 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 SNAPC5O75971 98 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 IL1AP01583 271 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 AMY2AP04746 511 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 HOXC12P31275 282 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 HNRNPFP52597 415 aaKnown RBP12.91□□□□□ -0.34
VCP-201ENST00000358901 CDK3Q00526 305 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ZMYND11Q15326 602 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 XKR7Q5GH72 579 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 B3GLCTQ6Y288 498 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 LILRA3Q8N6C8 439 aaPredicted RBP12.91□□□□□ -0.34
VCP-201ENST00000358901 BADQ92934 168 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 COQ10AQ96MF6 247 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 OR5M11Q96RB7 305 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 EGLN3Q9H6Z9 239 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 FKBP14Q9NWM8 211 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ABI3Q9P2A4 366 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 GPR34Q9UPC5 381 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 NUP214P35658 2090 aaPredicted RBP12.91□□□□□ -0.34
VCP-201ENST00000358901 PSMB10P40306 273 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 CLRN1P58418 232 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 SLCO4C1Q6ZQN7 724 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 OR5AK2Q8NH90 309 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms